RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 LENG1Q96BZ8 264 aaPredicted RBP19.26■□□□□ 0.67
LINC00404-201ENST00000418660 KATNBL1Q9H079 304 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 CPVLQ9H3G5 476 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 PHF24Q9UPV7 400 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 RBM8AQ9Y5S9 174 aaKnown RBP19.26■□□□□ 0.67
LINC00404-201ENST00000418660 TAF6LQ9Y6J9 622 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 CEP290O15078 2479 aa19.26■□□□□ 0.67
LINC00404-201ENST00000418660 DUSP11O75319 330 aaKnown RBP19.25■□□□□ 0.67
LINC00404-201ENST00000418660 BAATQ14032 418 aaPredicted RBP19.25■□□□□ 0.67
LINC00404-201ENST00000418660 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
LINC00404-201ENST00000418660 ESYT1Q9BSJ8 1104 aa19.25■□□□□ 0.67
LINC00404-201ENST00000418660 ADD3Q9UEY8 706 aaKnown RBP19.25■□□□□ 0.67
LINC00404-201ENST00000418660 ASTN1O14525 1302 aa19.25■□□□□ 0.67
LINC00404-201ENST00000418660 SYNRGQ9UMZ2 1314 aa19.25■□□□□ 0.67
LINC00404-201ENST00000418660 SMCHD1A6NHR9 2005 aa19.24■□□□□ 0.67
LINC00404-201ENST00000418660 IFIT3O14879 490 aaKnown RBP19.24■□□□□ 0.67
LINC00404-201ENST00000418660 RTP1P59025 263 aa19.24■□□□□ 0.67
LINC00404-201ENST00000418660 CDC37Q16543 378 aaPredicted RBP19.24■□□□□ 0.67
LINC00404-201ENST00000418660 STOX1Q6ZVD7 989 aa19.24■□□□□ 0.67
LINC00404-201ENST00000418660 ADGRF4Q8IZF3 695 aa19.24■□□□□ 0.67
LINC00404-201ENST00000418660 KLHDC9Q8NEP7 349 aa19.24■□□□□ 0.67
LINC00404-201ENST00000418660 FERMT2Q96AC1 680 aa19.24■□□□□ 0.67
LINC00404-201ENST00000418660 GDF15Q99988 308 aa19.24■□□□□ 0.67
LINC00404-201ENST00000418660 TSEN34Q9BSV6 310 aaKnown RBP19.24■□□□□ 0.67
LINC00404-201ENST00000418660 LSG1Q9H089 658 aaKnown RBP19.24■□□□□ 0.67
LINC00404-201ENST00000418660 LOC102724159A0A0B4J2E5 919 aa19.23■□□□□ 0.67
LINC00404-201ENST00000418660 A0A1W2PPC1 479 aa19.23■□□□□ 0.67
LINC00404-201ENST00000418660 ERICH2A1L162 156 aa19.23■□□□□ 0.67
LINC00404-201ENST00000418660 PTPDC1A2A3K4 754 aa19.23■□□□□ 0.67
LINC00404-201ENST00000418660 BMP8BP34820 402 aa19.23■□□□□ 0.67
LINC00404-201ENST00000418660 SNX17Q15036 470 aa19.23■□□□□ 0.67
LINC00404-201ENST00000418660 PWP2Q15269 919 aaKnown RBP19.23■□□□□ 0.67
LINC00404-201ENST00000418660 C1orf53Q5VUE5 145 aa19.23■□□□□ 0.67
LINC00404-201ENST00000418660 RNF207Q6ZRF8 634 aa19.23■□□□□ 0.67
LINC00404-201ENST00000418660 MORC4Q8TE76 937 aa19.23■□□□□ 0.67
LINC00404-201ENST00000418660 PURBQ96QR8 312 aaKnown RBP19.23■□□□□ 0.67
LINC00404-201ENST00000418660 ADCY6O43306 1168 aa19.22■□□□□ 0.67
LINC00404-201ENST00000418660 FXR1P51114 621 aaKnown RBP eCLIP19.22■□□□□ 0.67
LINC00404-201ENST00000418660 SART3Q15020 963 aaKnown RBP19.22■□□□□ 0.67
LINC00404-201ENST00000418660 USH1GQ495M9 461 aa19.22■□□□□ 0.67
LINC00404-201ENST00000418660 STAG2Q8N3U4 1231 aa19.22■□□□□ 0.67
LINC00404-201ENST00000418660 RGS22Q8NE09 1264 aa19.22■□□□□ 0.67
LINC00404-201ENST00000418660 CCDC136Q96JN2 1154 aa19.22■□□□□ 0.67
LINC00404-201ENST00000418660 MAF1Q9H063 256 aa19.22■□□□□ 0.67
LINC00404-201ENST00000418660 UPF3AQ9H1J1 476 aaKnown RBP19.22■□□□□ 0.67
LINC00404-201ENST00000418660 JMJD4Q9H9V9 463 aa19.22■□□□□ 0.67
LINC00404-201ENST00000418660 SPC25Q9HBM1 224 aa19.22■□□□□ 0.67
LINC00404-201ENST00000418660 ATP11BQ9Y2G3 1177 aa19.22■□□□□ 0.67
LINC00404-201ENST00000418660 PALM3A6NDB9 673 aaPredicted RBP19.21■□□□□ 0.67
LINC00404-201ENST00000418660 MOXD2PA6NHM9 499 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 DHX16O60231 1041 aaKnown RBP19.21■□□□□ 0.67
LINC00404-201ENST00000418660 CALML3P27482 149 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 CST5P28325 142 aaPredicted RBP19.21■□□□□ 0.67
LINC00404-201ENST00000418660 ALDH5A1P51649 535 aaPredicted RBP19.21■□□□□ 0.67
LINC00404-201ENST00000418660 ACLYP53396 1101 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 GJA9P57773 515 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 TNFAIP2Q03169 654 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 WTAPQ15007 396 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 CCSAPQ6IQ19 270 aaPredicted RBP19.21■□□□□ 0.67
LINC00404-201ENST00000418660 SLC30A10Q6XR72 485 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 CHST3Q7LGC8 479 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 MB21D2Q8IYB1 491 aaPredicted RBP19.21■□□□□ 0.67
LINC00404-201ENST00000418660 VAT1LQ9HCJ6 419 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 MAD2L2Q9UI95 211 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 ABCB11O95342 1321 aa19.21■□□□□ 0.67
LINC00404-201ENST00000418660 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.2■□□□□ 0.66
LINC00404-201ENST00000418660 A0A1W2PQ45 241 aaPredicted RBP19.2■□□□□ 0.66
LINC00404-201ENST00000418660 A0A1W2PQY0 241 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 KLRF2D3W0D1 207 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 C6orf222P0C671 652 aaPredicted RBP19.2■□□□□ 0.66
LINC00404-201ENST00000418660 MAGEA10P43363 369 aaPredicted RBP19.2■□□□□ 0.66
LINC00404-201ENST00000418660 ANTXR2P58335 489 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 RPS6P62753 249 aaKnown RBP19.2■□□□□ 0.66
LINC00404-201ENST00000418660 KCNA10Q16322 511 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 QRICH1Q2TAL8 776 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 TRIM60Q495X7 471 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 IQSEC1Q6DN90 963 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 TAPT1Q6NXT6 567 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 FBXO11Q86XK2 927 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 PCSK9Q8NBP7 692 aaKnown RBP19.2■□□□□ 0.66
LINC00404-201ENST00000418660 NUP133Q8WUM0 1156 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 VTA1Q9NP79 307 aa19.2■□□□□ 0.66
LINC00404-201ENST00000418660 DDX49Q9Y6V7 483 aaKnown RBP19.2■□□□□ 0.66
LINC00404-201ENST00000418660 MCM3APO60318 1980 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 MYADML2A6NDP7 307 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 SLC27A2O14975 620 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 NKX3-2P78367 333 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 GRM4Q14833 912 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 NECTIN1Q15223 517 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 TMEM67Q5HYA8 995 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 EEPD1Q7L9B9 569 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 DNERQ8NFT8 737 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 IGDCC4Q8TDY8 1250 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 MTA3Q9BTC8 594 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 SENP2Q9HC62 589 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 ANO2Q9NQ90 1003 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 PDGFCQ9NRA1 345 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 PRKAG2Q9UGJ0 569 aa19.19■□□□□ 0.66
LINC00404-201ENST00000418660 GNEQ9Y223 722 aaKnown RBP19.19■□□□□ 0.66
LINC00404-201ENST00000418660 LCTP09848 1927 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms