RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PTGS1P23219 599 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 SLC1A4P43007 532 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 KLRC3Q07444 240 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 QRICH1Q2TAL8 776 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 CIAPIN1Q6FI81 312 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 MOXD1Q6UVY6 613 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 KCTD1Q719H9 257 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 CCDC186Q7Z3E2 898 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 SPC24Q8NBT2 197 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 KIAA1524Q8TCG1 905 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 MBOAT7Q96N66 472 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 MTRQ99707 1265 aa10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 NAP1L4Q99733 375 aaKnown RBP10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 BIN2Q9UBW5 565 aaPredicted RBP10.25□□□□□ -0.77
LINCMD1-201ENST00000418518 CLRN2A0PK11 232 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 TCP10L2B9ZVM9 353 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 CBFA2T2O43439 604 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 SLC26A4O43511 780 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 CCNT1O60563 726 aaKnown RBP10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 ZBTB7AO95365 584 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 MRPL12P52815 198 aaKnown RBP10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 GSDMDP57764 484 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 FANCCQ00597 558 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 ATP2B2Q01814 1243 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 FMR1Q06787 632 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 AP3B2Q13367 1082 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 KCNB1Q14721 858 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 CDC37Q16543 378 aaPredicted RBP10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 LETM2Q2VYF4 491 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 CCDC144BQ3MJ40 725 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 JAKMIP3Q5VZ66 844 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 CRYGNQ8WXF5 182 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 MED15Q96RN5 788 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 KBTBD4Q9NVX7 518 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 TMEM260Q9NX78 707 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 ZBTB21Q9ULJ3 1066 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 TMX2Q9Y320 296 aa10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
LINCMD1-201ENST00000418518 CYP3A7-CYP3A51PA0A087WV96 503 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 A0A1W2PRG0 241 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 PPP1R3GB7ZBB8 358 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 BMP3P12645 472 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 ATP1A3P13637 1013 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 CYP3A7P24462 503 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 SLC16A2P36021 539 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 UBA7P41226 1012 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 STAT6P42226 847 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 AFMP43652 599 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 PDIA5Q14554 519 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 TNIP1Q15025 636 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 KARSQ15046 597 aaKnown RBP10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 ISM2Q6H9L7 571 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 POTEDQ86YR6 584 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 LRRC15Q8TF66 581 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 ZNF830Q96NB3 372 aaPredicted RBP10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 MMTAG2Q9BU76 263 aaKnown RBP10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 GTPBP4Q9BZE4 634 aaKnown RBP10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 XPO4Q9C0E2 1151 aaKnown RBP10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 ARHGEF10LQ9HCE6 1279 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 RMND1Q9NWS8 449 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 IFNKQ9P0W0 207 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 NRBP1Q9UHY1 535 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 PYCARDQ9ULZ3 195 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 PAPPA2Q9BXP8 1791 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 RLFQ13129 1914 aa10.23□□□□□ -0.77
LINCMD1-201ENST00000418518 PP2D1A8MPX8 630 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 WNT10BO00744 389 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 SLC37A4O43826 429 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 KLRC4O43908 158 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 RPN1P04843 607 aaKnown RBP10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 CD44P16070 742 aaKnown RBP10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 HOXA7P31268 230 aaPredicted RBP10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 KCNJ6P48051 423 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 USP11P51784 963 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 TERF1P54274 439 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 TRAF1Q13077 416 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 ZNF658Q5TYW1 1059 aaPredicted RBP10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 CDKAL1Q5VV42 579 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 RRAGBQ5VZM2 374 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 CNNM4Q6P4Q7 775 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 CABP7Q86V35 215 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 DRC7Q8IY82 874 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 CCDC150Q8NCX0 1101 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 CACTINQ8WUQ7 758 aaKnown RBP10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 JDP2Q8WYK2 163 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 DPF2Q92785 391 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 AMNQ9BXJ7 453 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 PSTPIP2Q9H939 334 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 GOPCQ9HD26 462 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 MYOZ2Q9NPC6 264 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 KCND1Q9NSA2 647 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 STK17AQ9UEE5 414 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 SYNRGQ9UMZ2 1314 aa10.22□□□□□ -0.77
LINCMD1-201ENST00000418518 LOC285556D6RIA3 1793 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms