RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 MORC4Q8TE76 937 aa24.11■■□□□ 1.45
PKNOX1-202ENST00000418336 LENG1Q96BZ8 264 aaPredicted RBP24.11■■□□□ 1.45
PKNOX1-202ENST00000418336 HTATIP2Q9BUP3 242 aa24.11■■□□□ 1.45
PKNOX1-202ENST00000418336 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.11■■□□□ 1.45
PKNOX1-202ENST00000418336 PPP4R2Q9NY27 417 aa24.11■■□□□ 1.45
PKNOX1-202ENST00000418336 H0YGN5 161 aa24.1■■□□□ 1.45
PKNOX1-202ENST00000418336 POTEB2H3BUK9 544 aa24.1■■□□□ 1.45
PKNOX1-202ENST00000418336 NEFLP07196 543 aa24.1■■□□□ 1.45
PKNOX1-202ENST00000418336 PARP1P09874 1014 aaKnown RBP24.1■■□□□ 1.45
PKNOX1-202ENST00000418336 RALYLQ86SE5 291 aaKnown RBP24.1■■□□□ 1.45
PKNOX1-202ENST00000418336 CCDC144CPQ8IYA2 1237 aa24.1■■□□□ 1.45
PKNOX1-202ENST00000418336 RASEFQ8IZ41 740 aa24.1■■□□□ 1.45
PKNOX1-202ENST00000418336 MTA3Q9BTC8 594 aa24.1■■□□□ 1.45
PKNOX1-202ENST00000418336 DNM1LO00429 736 aa24.09■■□□□ 1.45
PKNOX1-202ENST00000418336 PPP1R11O60927 126 aaPredicted RBP24.09■■□□□ 1.45
PKNOX1-202ENST00000418336 QRICH1Q2TAL8 776 aa24.09■■□□□ 1.45
PKNOX1-202ENST00000418336 TSGA10IPQ3SY00 556 aa24.09■■□□□ 1.45
PKNOX1-202ENST00000418336 SLC30A10Q6XR72 485 aa24.09■■□□□ 1.45
PKNOX1-202ENST00000418336 KCNB2Q92953 911 aa24.09■■□□□ 1.45
PKNOX1-202ENST00000418336 SH2B2O14492 632 aaPredicted RBP24.08■■□□□ 1.45
PKNOX1-202ENST00000418336 CYTH3O43739 400 aa24.08■■□□□ 1.45
PKNOX1-202ENST00000418336 ADAMTS4O75173 837 aa24.08■■□□□ 1.45
PKNOX1-202ENST00000418336 ACVR2BQ13705 512 aa24.08■■□□□ 1.45
PKNOX1-202ENST00000418336 BAATQ14032 418 aaPredicted RBP24.08■■□□□ 1.45
PKNOX1-202ENST00000418336 WTAPQ15007 396 aa24.08■■□□□ 1.45
PKNOX1-202ENST00000418336 KLRF2D3W0D1 207 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 OPLAHO14841 1288 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 PRC1O43663 620 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 LRRC41Q15345 812 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 TMEM67Q5HYA8 995 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 GJC2Q5T442 439 aaPredicted RBP24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 NSMFQ6X4W1 530 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 DPF3Q92784 378 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 RIOX1Q9H6W3 641 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 PNMA2Q9UL42 364 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 CNPY2Q9Y2B0 182 aa24.07■■□□□ 1.44
PKNOX1-202ENST00000418336 AKR1A1P14550 325 aa24.06■■□□□ 1.44
PKNOX1-202ENST00000418336 LRRC26Q2I0M4 334 aa24.06■■□□□ 1.44
PKNOX1-202ENST00000418336 ADCK5Q3MIX3 580 aa24.06■■□□□ 1.44
PKNOX1-202ENST00000418336 CCSAPQ6IQ19 270 aaPredicted RBP24.06■■□□□ 1.44
PKNOX1-202ENST00000418336 RGS22Q8NE09 1264 aa24.06■■□□□ 1.44
PKNOX1-202ENST00000418336 TBC1D5Q92609 795 aa24.06■■□□□ 1.44
PKNOX1-202ENST00000418336 ABHD16BQ9H3Z7 469 aa24.06■■□□□ 1.44
PKNOX1-202ENST00000418336 IRX5P78411 483 aaPredicted RBP24.05■■□□□ 1.44
PKNOX1-202ENST00000418336 EXOSC10Q01780 885 aaKnown RBP24.05■■□□□ 1.44
PKNOX1-202ENST00000418336 USH1GQ495M9 461 aa24.05■■□□□ 1.44
PKNOX1-202ENST00000418336 PRO3102Q9H379 93 aa24.05■■□□□ 1.44
PKNOX1-202ENST00000418336 MYH6P13533 1939 aa24.05■■□□□ 1.44
PKNOX1-202ENST00000418336 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 CTAGE5O15320 804 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 PGK1P00558 417 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 EDNRBP24530 442 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 MCM5P33992 734 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 RPS6P62753 249 aaKnown RBP24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 NKX3-2P78367 333 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 GHRHRQ02643 423 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 CCDC144BQ3MJ40 725 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 TAPT1Q6NXT6 567 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 KLHDC9Q8NEP7 349 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 MAP3K14Q99558 947 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 XPNPEP3Q9NQH7 507 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 ZHX1Q9UKY1 873 aaPredicted RBP24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 FAM184BQ9ULE4 1060 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 SYNRGQ9UMZ2 1314 aa24.04■■□□□ 1.44
PKNOX1-202ENST00000418336 BAZ2BQ9UIF8 2168 aaKnown RBP24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 ERICH2A1L162 156 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 MYADML2A6NDP7 307 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 RARBP10826 455 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 LIFRP42702 1097 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 ALDH5A1P51649 535 aaPredicted RBP24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 SART3Q15020 963 aaKnown RBP24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 TMEM63BQ5T3F8 832 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 RNF207Q6ZRF8 634 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 TMEM87BQ96K49 555 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 MYL10Q9BUA6 226 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 UPF3AQ9H1J1 476 aaKnown RBP24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 VAT1LQ9HCJ6 419 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 COL20A1Q9P218 1284 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 PHF24Q9UPV7 400 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 ABCB11O95342 1321 aa24.03■■□□□ 1.44
PKNOX1-202ENST00000418336 ASB14A6NK59 587 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 EVI5O60447 810 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 CENPBP07199 599 aaPredicted RBP24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 PTGS1P23219 599 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 SNX17Q15036 470 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 CASC1Q6TDU7 716 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 ZNF654Q8IZM8 581 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 ARRDC4Q8NCT1 418 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 LRRC2Q9BYS8 371 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 SENP6Q9GZR1 1112 aaPredicted RBP24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 MAF1Q9H063 256 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 PDGFCQ9NRA1 345 aa24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 GNEQ9Y223 722 aaKnown RBP24.02■■□□□ 1.44
PKNOX1-202ENST00000418336 LOC102724159A0A0B4J2E5 919 aa24.01■■□□□ 1.43
PKNOX1-202ENST00000418336 ZBTB5O15062 677 aa24.01■■□□□ 1.43
PKNOX1-202ENST00000418336 DUSP11O75319 330 aaKnown RBP24.01■■□□□ 1.43
PKNOX1-202ENST00000418336 DDAH1O94760 285 aa24.01■■□□□ 1.43
PKNOX1-202ENST00000418336 PWP2Q15269 919 aaKnown RBP24.01■■□□□ 1.43
PKNOX1-202ENST00000418336 SGMS1Q86VZ5 419 aa24.01■■□□□ 1.43
PKNOX1-202ENST00000418336 FBXO11Q86XK2 927 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms