RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 PALM3A6NDB9 673 aaPredicted RBP16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 CCDC69A6NI79 296 aa16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 DNM1LO00429 736 aa16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 EPB41L2O43491 1005 aaKnown RBP16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 HMGB1P09429 215 aaKnown RBP16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 TSGA10IPQ3SY00 556 aa16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 USH1GQ495M9 461 aa16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 RNF207Q6ZRF8 634 aa16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 ARMCX2Q7L311 632 aa16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 CTCFLQ8NI51 663 aaPredicted RBP16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 NEK1Q96PY6 1258 aa16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 MAD2L2Q9UI95 211 aa16.53■□□□□ 0.24
SLC13A3-205ENST00000417157 PLXNA1Q9UIW2 1896 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 B4DLN1 442 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 KBTBD13C9JR72 458 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 NFIBO00712 420 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 ZNF865P0CJ78 1059 aaPredicted RBP16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 CALM1P0DP23 149 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 CALM2P0DP24 149 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 CALM3P0DP25 149 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 LIFRP42702 1097 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 MRPL12P52815 198 aaKnown RBP16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 CNTN2Q02246 1040 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 TROAPQ12815 778 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 QRICH1Q2TAL8 776 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 PRAMEF19Q5SWL8 479 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 FBXO11Q86XK2 927 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 MCF2L2Q86YR7 1114 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 RGS22Q8NE09 1264 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 DIS3LQ8TF46 1054 aaKnown RBP16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 AMNQ9BXJ7 453 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 CPVLQ9H3G5 476 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 JMJD4Q9H9V9 463 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 FAM184BQ9ULE4 1060 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 MRPL11Q9Y3B7 192 aaKnown RBP16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 NR2E3Q9Y5X4 410 aa16.52■□□□□ 0.24
SLC13A3-205ENST00000417157 ZBTB5O15062 677 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 SNAI1O95863 264 aaPredicted RBP16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 ACVR2BQ13705 512 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 BAATQ14032 418 aaPredicted RBP16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 ZNF654Q8IZM8 581 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 NUP133Q8WUM0 1156 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 FGD4Q96M96 766 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 VAT1LQ9HCJ6 419 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 XPNPEP3Q9NQH7 507 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 BRCA2P51587 3418 aa16.51■□□□□ 0.23
SLC13A3-205ENST00000417157 EVI5O60447 810 aa16.5■□□□□ 0.23
SLC13A3-205ENST00000417157 CALML3P27482 149 aa16.5■□□□□ 0.23
SLC13A3-205ENST00000417157 GNAQP50148 359 aa16.5■□□□□ 0.23
SLC13A3-205ENST00000417157 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
SLC13A3-205ENST00000417157 SYNE3Q6ZMZ3 975 aa16.5■□□□□ 0.23
SLC13A3-205ENST00000417157 RNF180Q86T96 592 aa16.5■□□□□ 0.23
SLC13A3-205ENST00000417157 CLEC4DQ8WXI8 215 aa16.5■□□□□ 0.23
SLC13A3-205ENST00000417157 SLC12A7Q9Y666 1083 aa16.5■□□□□ 0.23
SLC13A3-205ENST00000417157 ZNFX1Q9P2E3 1918 aaKnown RBP16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 SOWAHBA6NEL2 793 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 EIF5BO60841 1220 aaKnown RBP16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 COL6A1P12109 1028 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 TAL1P17542 331 aaPredicted RBP16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 HSPA4P34932 840 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 RPS6P62753 249 aaKnown RBP16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 ANO1Q5XXA6 986 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 SLC30A10Q6XR72 485 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 DHX32Q7L7V1 743 aaKnown RBP16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 SGMS1Q86VZ5 419 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 DNERQ8NFT8 737 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 MTMR8Q96EF0 704 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 RIOX1Q9H6W3 641 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 SPC25Q9HBM1 224 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 SENP2Q9HC62 589 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 VTA1Q9NP79 307 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 FRMPD3Q5JV73 1810 aa16.49■□□□□ 0.23
SLC13A3-205ENST00000417157 DUSP11O75319 330 aaKnown RBP16.48■□□□□ 0.23
SLC13A3-205ENST00000417157 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
SLC13A3-205ENST00000417157 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
SLC13A3-205ENST00000417157 ALDH5A1P51649 535 aaPredicted RBP16.48■□□□□ 0.23
SLC13A3-205ENST00000417157 HOMER1Q86YM7 354 aa16.48■□□□□ 0.23
SLC13A3-205ENST00000417157 SAMD3Q8N6K7 520 aa16.48■□□□□ 0.23
SLC13A3-205ENST00000417157 MORC4Q8TE76 937 aa16.48■□□□□ 0.23
SLC13A3-205ENST00000417157 MAP3K20Q9NYL2 800 aaKnown RBP16.48■□□□□ 0.23
SLC13A3-205ENST00000417157 SEC63Q9UGP8 760 aaKnown RBP16.48■□□□□ 0.23
SLC13A3-205ENST00000417157 PNMA6FA0A0J9YX94 578 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 PSMA5P28066 241 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 FGD1P98174 961 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 LRRC41Q15345 812 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 CCDC144BQ3MJ40 725 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 GJC2Q5T442 439 aaPredicted RBP16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 KCNB2Q92953 911 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 PIGSQ96S52 555 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 SPZ1Q9BXG8 430 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 PCDHA1Q9Y5I3 950 aa16.47■□□□□ 0.23
SLC13A3-205ENST00000417157 PDE4DQ08499 809 aa16.46■□□□□ 0.23
SLC13A3-205ENST00000417157 RRP36Q96EU6 259 aaKnown RBP16.46■□□□□ 0.23
SLC13A3-205ENST00000417157 MYL10Q9BUA6 226 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms