RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 PARP1P09874 1014 aaKnown RBP11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 PTGS1P23219 599 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 SEC23AQ15436 765 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 CCDC144BQ3MJ40 725 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 TMEM63BQ5T3F8 832 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 SLC30A10Q6XR72 485 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 RNF180Q86T96 592 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 MSL3Q8N5Y2 521 aaKnown RBP11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 NCOA7Q8NI08 942 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 CLEC4DQ8WXI8 215 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 TBC1D5Q92609 795 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 LSG1Q9H089 658 aaKnown RBP11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 ABHD16BQ9H3Z7 469 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 ANO2Q9NQ90 1003 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 PDGFCQ9NRA1 345 aa11.9□□□□□ -0.5
NCKIPSD-202ENST00000413374 ASTN1O14525 1302 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 ERICH2A1L162 156 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 MYADML2A6NDP7 307 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 ASB14A6NK59 587 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 ADCY6O43306 1168 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 NT5C2P49902 561 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 RTP1P59025 263 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 CDC37Q16543 378 aaPredicted RBP11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 RNF207Q6ZRF8 634 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 FBXO16Q8IX29 292 aaPredicted RBP11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 JMJD4Q9H9V9 463 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 GPHNQ9NQX3 736 aaPredicted RBP11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 MYH4Q9Y623 1939 aa11.89□□□□□ -0.51
NCKIPSD-202ENST00000413374 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 PDE4DIPQ5VU43 2346 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 KLRF2D3W0D1 207 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 SLC27A2O14975 620 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 ADAMTS4O75173 837 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 C6orf222P0C671 652 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 MAGEA10P43363 369 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 ANTXR2P58335 489 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 TNFAIP2Q03169 654 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 COL9A3Q14050 684 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 WTAPQ15007 396 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 KCNA10Q16322 511 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 QRICH1Q2TAL8 776 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 TRIM60Q495X7 471 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 BMP2KLQ5H9B9 411 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 PIBF1Q8WXW3 757 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 VTI1AQ96AJ9 217 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 KATNBL1Q9H079 304 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 PRDM5Q9NQX1 630 aaPredicted RBP11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 MAD2L2Q9UI95 211 aa11.88□□□□□ -0.51
NCKIPSD-202ENST00000413374 SYNRGQ9UMZ2 1314 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 DYNC1LI2O43237 492 aaPredicted RBP11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 DUSP11O75319 330 aaKnown RBP11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 NEFLP07196 543 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 ALDH5A1P51649 535 aaPredicted RBP11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 ACLYP53396 1101 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 RPS6P62753 249 aaKnown RBP11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 BEX3Q00994 111 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 CREB3L3Q68CJ9 461 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 FBXO11Q86XK2 927 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 HOMER1Q86YM7 354 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 IGDCC4Q8TDY8 1250 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 NUP133Q8WUM0 1156 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 LRRC2Q9BYS8 371 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 PHF24Q9UPV7 400 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 PARP14Q460N5 1801 aa11.87□□□□□ -0.51
NCKIPSD-202ENST00000413374 ZNF236Q9UL36 1845 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 A0A1W2PQ45 241 aaPredicted RBP11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 A0A1W2PQY0 241 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 PALM3A6NDB9 673 aaPredicted RBP11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 PRC1O43663 620 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 SMPD1P17405 629 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 FXR1P51114 621 aaKnown RBP eCLIP11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 TLE2Q04725 743 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 SART3Q15020 963 aaKnown RBP11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 GNASQ5JWF2 1037 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 TAPT1Q6NXT6 567 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 NFXL1Q6ZNB6 911 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 SH3RF1Q7Z6J0 888 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 CATIPQ7Z7H3 387 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 RAB11FIP4Q86YS3 637 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 MB21D2Q8IYB1 491 aaPredicted RBP11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 KLHDC9Q8NEP7 349 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 TAAR1Q96RJ0 339 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 GDF15Q99988 308 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 PRO3102Q9H379 93 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 SPC25Q9HBM1 224 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 ADD3Q9UEY8 706 aaKnown RBP11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 PRKAG2Q9UGJ0 569 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 WDR19Q8NEZ3 1342 aa11.86□□□□□ -0.51
NCKIPSD-202ENST00000413374 PQBP1O60828 265 aaKnown RBP11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 CDC45O75419 566 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 ASGR1P07306 291 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 GJA9P57773 515 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 PDE4DQ08499 809 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 GRM4Q14833 912 aa11.85□□□□□ -0.51
NCKIPSD-202ENST00000413374 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms