RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 CALM1P0DP23 149 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 CALM2P0DP24 149 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 CALM3P0DP25 149 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
HDAC8-210ENST00000412342 SMARCA1P28370 1054 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 ANAPC15P60006 121 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 CACNB2Q08289 660 aaPredicted RBP15.32■□□□□ 0.04
HDAC8-210ENST00000412342 RUFY3Q7L099 469 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 MICU3Q86XE3 530 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 FAM133AQ8N9E0 248 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 CTCFLQ8NI51 663 aaPredicted RBP15.32■□□□□ 0.04
HDAC8-210ENST00000412342 SPZ1Q9BXG8 430 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 VAT1LQ9HCJ6 419 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 PAK6Q9NQU5 681 aaPredicted RBP15.32■□□□□ 0.04
HDAC8-210ENST00000412342 ASTN1O14525 1302 aa15.32■□□□□ 0.04
HDAC8-210ENST00000412342 KLF18A0A0U1RQI7 1052 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 ZBTB5O15062 677 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 EIF5BO60841 1220 aaKnown RBP15.31■□□□□ 0.04
HDAC8-210ENST00000412342 KIF5BP33176 963 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 CYP2C19P33261 490 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 RCAN1P53805 252 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 EVCP57679 992 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 TOB2Q14106 344 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-210ENST00000412342 TMTC3Q6ZXV5 915 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 CCDC144CPQ8IYA2 1237 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 ANKRD35Q8N283 1001 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 SRBD1Q8N5C6 995 aaKnown RBP15.31■□□□□ 0.04
HDAC8-210ENST00000412342 FANCBQ8NB91 859 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 TRPV1Q8NER1 839 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 BRF1Q92994 677 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 SHISA4Q96DD7 197 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 PIGSQ96S52 555 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 UPF3BQ9BZI7 483 aaKnown RBP15.31■□□□□ 0.04
HDAC8-210ENST00000412342 FAM217BQ9NTX9 383 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-210ENST00000412342 SLC5A4Q9NY91 659 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 CYP39A1Q9NYL5 469 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 BIN2Q9UBW5 565 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-210ENST00000412342 RPTORQ8N122 1335 aa15.31■□□□□ 0.04
HDAC8-210ENST00000412342 SOWAHBA6NEL2 793 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 OPLAHO14841 1288 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 PFASO15067 1338 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 ZBTB43O43298 467 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 DHX16O60231 1041 aaKnown RBP15.3■□□□□ 0.04
HDAC8-210ENST00000412342 ABCB11O95342 1321 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 CYBAP13498 195 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 CNTN2Q02246 1040 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 FUT2Q10981 343 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 USH1GQ495M9 461 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 MAMDC4Q6UXC1 1216 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 ZNF467Q7Z7K2 595 aaPredicted RBP15.3■□□□□ 0.04
HDAC8-210ENST00000412342 FBXO11Q86XK2 927 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 CMTR1Q8N1G2 835 aaKnown RBP15.3■□□□□ 0.04
HDAC8-210ENST00000412342 DDX11Q96FC9 970 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 LZTS2Q9BRK4 669 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDAC8-210ENST00000412342 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
HDAC8-210ENST00000412342 CNTNAP5Q8WYK1 1306 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 GJB1P08034 283 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 CCND3P30281 292 aaPredicted RBP15.29■□□□□ 0.04
HDAC8-210ENST00000412342 RGS19P49795 217 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 GNAQP50148 359 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 GHRHRQ02643 423 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 MFSD14CQ5VZR4 134 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 SLC30A10Q6XR72 485 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 HOMER1Q86YM7 354 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 RGS22Q8NE09 1264 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 PURBQ96QR8 312 aaKnown RBP15.29■□□□□ 0.04
HDAC8-210ENST00000412342 TINF2Q9BSI4 451 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 RNF208Q9H0X6 261 aa15.29■□□□□ 0.04
HDAC8-210ENST00000412342 SYNGAP1Q96PV0 1343 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 PNMA6FA0A0J9YX94 578 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 POTEB2H3BUK9 544 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 CDC27P30260 824 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 GJA8P48165 433 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 BAATQ14032 418 aaPredicted RBP15.28■□□□□ 0.04
HDAC8-210ENST00000412342 RTN1Q16799 776 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 NSMFQ6X4W1 530 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 MSL3Q8N5Y2 521 aaKnown RBP15.28■□□□□ 0.04
HDAC8-210ENST00000412342 TBC1D5Q92609 795 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 TMEM106CQ9BVX2 250 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 MAF1Q9H063 256 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 CRISPLD2Q9H0B8 497 aa15.28■□□□□ 0.04
HDAC8-210ENST00000412342 HMX1Q9NP08 348 aaPredicted RBP15.28■□□□□ 0.04
HDAC8-210ENST00000412342 RBM28Q9NW13 759 aaKnown RBP15.28■□□□□ 0.04
HDAC8-210ENST00000412342 GOLGA8AA7E2F4 631 aa15.27■□□□□ 0.04
HDAC8-210ENST00000412342 GOLGA8BA8MQT2 603 aa15.27■□□□□ 0.04
HDAC8-210ENST00000412342 SNAI1O95863 264 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-210ENST00000412342 EN2P19622 333 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-210ENST00000412342 RPS6P62753 249 aaKnown RBP15.27■□□□□ 0.04
HDAC8-210ENST00000412342 FGD1P98174 961 aa15.27■□□□□ 0.04
HDAC8-210ENST00000412342 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.04
HDAC8-210ENST00000412342 RNF207Q6ZRF8 634 aa15.27■□□□□ 0.04
HDAC8-210ENST00000412342 U2AF1L4Q8WU68 220 aaKnown RBP15.27■□□□□ 0.04
HDAC8-210ENST00000412342 DEFB118Q96PH6 123 aa15.27■□□□□ 0.04
HDAC8-210ENST00000412342 KATNBL1Q9H079 304 aa15.27■□□□□ 0.04
HDAC8-210ENST00000412342 ALDH8A1Q9H2A2 487 aaPredicted RBP15.27■□□□□ 0.04
HDAC8-210ENST00000412342 COL20A1Q9P218 1284 aa15.27■□□□□ 0.04
HDAC8-210ENST00000412342 NRBP1Q9UHY1 535 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms