RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 KRT32Q14532 448 aa18.88■□□□□ 0.61
DDR1-230ENST00000412274 TSGA10IPQ3SY00 556 aa18.88■□□□□ 0.61
DDR1-230ENST00000412274 MUM1L1Q5H9M0 696 aa18.88■□□□□ 0.61
DDR1-230ENST00000412274 PRAMEF19Q5SWL8 479 aa18.88■□□□□ 0.61
DDR1-230ENST00000412274 NSMFQ6X4W1 530 aa18.88■□□□□ 0.61
DDR1-230ENST00000412274 STOX1Q6ZVD7 989 aa18.88■□□□□ 0.61
DDR1-230ENST00000412274 RNF180Q86T96 592 aa18.88■□□□□ 0.61
DDR1-230ENST00000412274 IGDCC4Q8TDY8 1250 aa18.88■□□□□ 0.61
DDR1-230ENST00000412274 UBA5Q9GZZ9 404 aa18.88■□□□□ 0.61
DDR1-230ENST00000412274 EPB41L2O43491 1005 aaKnown RBP18.87■□□□□ 0.61
DDR1-230ENST00000412274 DHX16O60231 1041 aaKnown RBP18.87■□□□□ 0.61
DDR1-230ENST00000412274 CNTN2Q02246 1040 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 GRM4Q14833 912 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 CDC37Q16543 378 aaPredicted RBP18.87■□□□□ 0.61
DDR1-230ENST00000412274 FRMPD3Q5JV73 1810 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 ARMCX2Q7L311 632 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 MCF2L2Q86YR7 1114 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 SAMD3Q8N6K7 520 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 DNERQ8NFT8 737 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 DIS3LQ8TF46 1054 aaKnown RBP18.87■□□□□ 0.61
DDR1-230ENST00000412274 SPC25Q9HBM1 224 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 XPNPEP3Q9NQH7 507 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 MAD2L2Q9UI95 211 aa18.87■□□□□ 0.61
DDR1-230ENST00000412274 MRPL11Q9Y3B7 192 aaKnown RBP18.87■□□□□ 0.61
DDR1-230ENST00000412274 PRC1O43663 620 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 DUSP11O75319 330 aaKnown RBP18.86■□□□□ 0.61
DDR1-230ENST00000412274 DDAH1O94760 285 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 REC8O95072 547 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 HMGB1P09429 215 aaKnown RBP18.86■□□□□ 0.61
DDR1-230ENST00000412274 CALM1P0DP23 149 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 CALM2P0DP24 149 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 CALM3P0DP25 149 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 SMARCA1P28370 1054 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 KIF5BP33176 963 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 LIFRP42702 1097 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 TROAPQ12815 778 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 RNF207Q6ZRF8 634 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 SKAP1Q86WV1 359 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 FBXO11Q86XK2 927 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 CCDC144CPQ8IYA2 1237 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 MORC4Q8TE76 937 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 FGD4Q96M96 766 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 LZTS2Q9BRK4 669 aa18.86■□□□□ 0.61
DDR1-230ENST00000412274 TSEN34Q9BSV6 310 aaKnown RBP18.86■□□□□ 0.61
DDR1-230ENST00000412274 MAP3K20Q9NYL2 800 aaKnown RBP18.86■□□□□ 0.61
DDR1-230ENST00000412274 ZHX1Q9UKY1 873 aaPredicted RBP18.86■□□□□ 0.61
DDR1-230ENST00000412274 PTPDC1A2A3K4 754 aa18.85■□□□□ 0.61
DDR1-230ENST00000412274 SOWAHBA6NEL2 793 aa18.85■□□□□ 0.61
DDR1-230ENST00000412274 GNAQP50148 359 aa18.85■□□□□ 0.61
DDR1-230ENST00000412274 ANTXR2P58335 489 aa18.85■□□□□ 0.61
DDR1-230ENST00000412274 BAATQ14032 418 aaPredicted RBP18.85■□□□□ 0.61
DDR1-230ENST00000412274 CLEC4DQ8WXI8 215 aa18.85■□□□□ 0.61
DDR1-230ENST00000412274 AMNQ9BXJ7 453 aa18.85■□□□□ 0.61
DDR1-230ENST00000412274 JMJD4Q9H9V9 463 aa18.85■□□□□ 0.61
DDR1-230ENST00000412274 TAF6LQ9Y6J9 622 aa18.85■□□□□ 0.61
DDR1-230ENST00000412274 CCDC69A6NI79 296 aa18.84■□□□□ 0.61
DDR1-230ENST00000412274 ZBTB5O15062 677 aa18.84■□□□□ 0.61
DDR1-230ENST00000412274 TAL1P17542 331 aaPredicted RBP18.84■□□□□ 0.61
DDR1-230ENST00000412274 LRRC41Q15345 812 aa18.84■□□□□ 0.61
DDR1-230ENST00000412274 QRICH1Q2TAL8 776 aa18.84■□□□□ 0.61
DDR1-230ENST00000412274 CTCFLQ8NI51 663 aaPredicted RBP18.84■□□□□ 0.61
DDR1-230ENST00000412274 MTMR8Q96EF0 704 aa18.84■□□□□ 0.61
DDR1-230ENST00000412274 NEK1Q96PY6 1258 aa18.84■□□□□ 0.61
DDR1-230ENST00000412274 RIOX1Q9H6W3 641 aa18.84■□□□□ 0.61
DDR1-230ENST00000412274 LY9Q9HBG7 655 aa18.84■□□□□ 0.61
DDR1-230ENST00000412274 VTA1Q9NP79 307 aa18.84■□□□□ 0.61
DDR1-230ENST00000412274 NFIBO00712 420 aa18.83■□□□□ 0.6
DDR1-230ENST00000412274 USH1GQ495M9 461 aa18.83■□□□□ 0.6
DDR1-230ENST00000412274 GJC2Q5T442 439 aaPredicted RBP18.83■□□□□ 0.6
DDR1-230ENST00000412274 IQSEC1Q6DN90 963 aa18.83■□□□□ 0.6
DDR1-230ENST00000412274 NFXL1Q6ZNB6 911 aa18.83■□□□□ 0.6
DDR1-230ENST00000412274 CHST3Q7LGC8 479 aa18.83■□□□□ 0.6
DDR1-230ENST00000412274 STAG2Q8N3U4 1231 aa18.83■□□□□ 0.6
DDR1-230ENST00000412274 SENP6Q9GZR1 1112 aaPredicted RBP18.83■□□□□ 0.6
DDR1-230ENST00000412274 VAT1LQ9HCJ6 419 aa18.83■□□□□ 0.6
DDR1-230ENST00000412274 MOXD2PA6NHM9 499 aa18.82■□□□□ 0.6
DDR1-230ENST00000412274 H0YGN5 161 aa18.82■□□□□ 0.6
DDR1-230ENST00000412274 SH2B2O14492 632 aaPredicted RBP18.82■□□□□ 0.6
DDR1-230ENST00000412274 ALDH5A1P51649 535 aaPredicted RBP18.82■□□□□ 0.6
DDR1-230ENST00000412274 RPS6P62753 249 aaKnown RBP18.82■□□□□ 0.6
DDR1-230ENST00000412274 CCDC144BQ3MJ40 725 aa18.82■□□□□ 0.6
DDR1-230ENST00000412274 C1orf53Q5VUE5 145 aa18.82■□□□□ 0.6
DDR1-230ENST00000412274 SYNE3Q6ZMZ3 975 aa18.82■□□□□ 0.6
DDR1-230ENST00000412274 ZNF654Q8IZM8 581 aa18.82■□□□□ 0.6
DDR1-230ENST00000412274 PCSK9Q8NBP7 692 aaKnown RBP18.82■□□□□ 0.6
DDR1-230ENST00000412274 KATNBL1Q9H079 304 aa18.82■□□□□ 0.6
DDR1-230ENST00000412274 Q9Y3F1 56 aa18.82■□□□□ 0.6
DDR1-230ENST00000412274 EIF5BO60841 1220 aaKnown RBP18.81■□□□□ 0.6
DDR1-230ENST00000412274 CALML3P27482 149 aa18.81■□□□□ 0.6
DDR1-230ENST00000412274 CST5P28325 142 aaPredicted RBP18.81■□□□□ 0.6
DDR1-230ENST00000412274 NKX3-2P78367 333 aa18.81■□□□□ 0.6
DDR1-230ENST00000412274 ANO1Q5XXA6 986 aa18.81■□□□□ 0.6
DDR1-230ENST00000412274 DHX32Q7L7V1 743 aaKnown RBP18.81■□□□□ 0.6
DDR1-230ENST00000412274 SGMS1Q86VZ5 419 aa18.81■□□□□ 0.6
DDR1-230ENST00000412274 NUP133Q8WUM0 1156 aa18.81■□□□□ 0.6
DDR1-230ENST00000412274 KCNB2Q92953 911 aa18.81■□□□□ 0.6
DDR1-230ENST00000412274 SPZ1Q9BXG8 430 aa18.81■□□□□ 0.6
DDR1-230ENST00000412274 CPVLQ9H3G5 476 aa18.81■□□□□ 0.6
DDR1-230ENST00000412274 PHF24Q9UPV7 400 aa18.81■□□□□ 0.6
DDR1-230ENST00000412274 SLC12A7Q9Y666 1083 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms