RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 NLRC4Q9NPP4 1024 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 FAM207AQ9NSI2 230 aaPredicted RBP12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 KCNJ14Q9UNX9 436 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 SRGAP2BP0DMP2 458 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 CCNA1P78396 465 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 NUP58Q9BVL2 599 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 GARSP41250 739 aaKnown RBP12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 TRIM14Q14142 442 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 KCTD2Q14681 263 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 C10orf67Q8IYJ2 551 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 ZAP70P43403 619 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 EPHB1P54762 984 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 SESN3P58005 492 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 B4GALNT4Q76KP1 1039 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 DNAJC10Q8IXB1 793 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 YIPF2Q9BWQ6 316 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 VCX3AQ9NNX9 186 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 PCDHA12Q9UN75 941 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 USP19O94966 1318 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 MROH5Q6ZUA9 1318 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 MAFGO15525 162 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 KRBA2Q6ZNG9 492 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 AMFRQ9UKV5 643 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 TRIM35Q9UPQ4 493 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 TBC1D22AQ8WUA7 517 aa12.28□□□□□ -0.44
PRPF40A-202ENST00000410080 NONOQ15233 471 aaKnown RBP eCLIP12.27□□□□□ -0.44
PRPF40A-202ENST00000410080 CCDC93Q567U6 631 aa12.27□□□□□ -0.44
PRPF40A-202ENST00000410080 KRT25Q7Z3Z0 450 aa12.27□□□□□ -0.44
PRPF40A-202ENST00000410080 NR1H4Q96RI1 486 aaPredicted RBP12.27□□□□□ -0.44
PRPF40A-202ENST00000410080 NEMP1O14524 444 aa12.27□□□□□ -0.44
PRPF40A-202ENST00000410080 MYL5Q02045 173 aa12.27□□□□□ -0.44
PRPF40A-202ENST00000410080 ZBTB41Q5SVQ8 909 aa12.27□□□□□ -0.44
PRPF40A-202ENST00000410080 ZNF513Q8N8E2 541 aaPredicted RBP12.27□□□□□ -0.44
PRPF40A-202ENST00000410080 TMEM87BQ96K49 555 aa12.27□□□□□ -0.44
PRPF40A-202ENST00000410080 INO80B-WBP1J3KQ70 363 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 PMLP29590 882 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 OSTNP61366 133 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 FAM178BQ8IXR5 827 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 TTC25Q96NG3 672 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 TEKT3Q9BXF9 490 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 INO80BQ9C086 356 aaPredicted RBP12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 DCTPP1Q9H773 170 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 UBXN2AP68543 259 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 RPS6KA1Q15418 735 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 HABP4Q5JVS0 413 aaKnown RBP12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 CCNYQ8ND76 341 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 TAB2Q9NYJ8 693 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 KRT10P13645 584 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 GUCY2FP51841 1108 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 TUBB4BP68371 445 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 TRIM68Q6AZZ1 485 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 TTLL7Q6ZT98 887 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 RFX6Q8HWS3 928 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 RNF139Q8WU17 664 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 RIC8AQ9NPQ8 531 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 SLFN12Q8IYM2 578 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 PPM1KQ8N3J5 372 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 PRIMPOLQ96LW4 560 aa12.27□□□□□ -0.45
PRPF40A-202ENST00000410080 THAP12O43422 761 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 POSTNQ15063 836 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 ARMCX5Q6P1M9 558 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 COG4Q9H9E3 785 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 GON4LQ3T8J9 2241 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 MIS18BP1Q6P0N0 1132 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 P3H4Q92791 437 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 CPSF2Q9P2I0 782 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 ZBBXA8MT70 800 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 RXRBP28702 533 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 TSNAXIP1Q2TAA8 658 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 INPP5FQ9Y2H2 1132 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 ATP8B3O60423 1300 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 FBXO11Q86XK2 927 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 SDR42E1Q8WUS8 393 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 KCNG1Q9UIX4 513 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 SLC4A7Q9Y6M7 1214 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 ABCC10Q5T3U5 1492 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 ABCB5Q2M3G0 1257 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 ARHGEF1Q92888 912 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 IWS1Q96ST2 819 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 RAB17Q9H0T7 212 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 STAT1P42224 750 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 EVCP57679 992 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 TFDP1Q14186 410 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 ANO1Q5XXA6 986 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 DNAAF3Q8N9W5 541 aa12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 PDCD6IPQ8WUM4 868 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■■□□ 17.7
PRPF40A-202ENST00000410080 TSR3Q9UJK0 312 aaKnown RBP12.26□□□□□ -0.45
PRPF40A-202ENST00000410080 CCND2P30279 289 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 CFAP221Q4G0U5 840 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 KCTD1Q719H9 257 aa12.25□□□□□ -0.45
PRPF40A-202ENST00000410080 LPIN2Q92539 896 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms