RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 COL9A1P20849 921 aa25■■□□□ 1.59
RHBDD3-202ENST00000406335 SLC1A4P43007 532 aa25■■□□□ 1.59
RHBDD3-202ENST00000406335 CCL23P55773 120 aa25■■□□□ 1.59
RHBDD3-202ENST00000406335 TLK2Q86UE8 772 aa25■■□□□ 1.59
RHBDD3-202ENST00000406335 HERVK_113Q902F9 699 aa25■■□□□ 1.59
RHBDD3-202ENST00000406335 FGD4Q96M96 766 aa25■■□□□ 1.59
RHBDD3-202ENST00000406335 TSPYL2Q9H2G4 693 aaPredicted RBP25■■□□□ 1.59
RHBDD3-202ENST00000406335 SYNPO2Q9UMS6 1093 aa25■■□□□ 1.59
RHBDD3-202ENST00000406335 ALAS1P13196 640 aa24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 MRPS5P82675 430 aaKnown RBP24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 TFAP4Q01664 338 aa24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 FSCN1Q16658 493 aaKnown RBP24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 RASIP1Q5U651 963 aa24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 EEPD1Q7L9B9 569 aa24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 FAM160B2Q86V87 743 aa24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 AGBL1Q96MI9 1066 aa24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 TRERF1Q96PN7 1200 aa24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 ASB2Q96Q27 587 aa24.99■■□□□ 1.59
RHBDD3-202ENST00000406335 CD4P01730 458 aa24.98■■□□□ 1.59
RHBDD3-202ENST00000406335 IGHDP01880 384 aa24.98■■□□□ 1.59
RHBDD3-202ENST00000406335 RPUSD2Q8IZ73 545 aaKnown RBP24.98■■□□□ 1.59
RHBDD3-202ENST00000406335 IFNL3Q8IZI9 196 aa24.98■■□□□ 1.59
RHBDD3-202ENST00000406335 MICALL1Q8N3F8 863 aa24.98■■□□□ 1.59
RHBDD3-202ENST00000406335 STAG1Q8WVM7 1258 aa24.98■■□□□ 1.59
RHBDD3-202ENST00000406335 A1CFQ9NQ94 594 aaKnown RBP24.98■■□□□ 1.59
RHBDD3-202ENST00000406335 CXXC1Q9P0U4 656 aaPredicted RBP24.98■■□□□ 1.59
RHBDD3-202ENST00000406335 PLXNA1Q9UIW2 1896 aa24.98■■□□□ 1.59
RHBDD3-202ENST00000406335 MYH4Q9Y623 1939 aa24.97■■□□□ 1.59
RHBDD3-202ENST00000406335 ZBBXA8MT70 800 aa24.97■■□□□ 1.59
RHBDD3-202ENST00000406335 M0R2C6 588 aa24.97■■□□□ 1.59
RHBDD3-202ENST00000406335 MCCP23508 829 aa24.97■■□□□ 1.59
RHBDD3-202ENST00000406335 TKFCQ3LXA3 575 aa24.97■■□□□ 1.59
RHBDD3-202ENST00000406335 FAM133AQ8N9E0 248 aa24.97■■□□□ 1.59
RHBDD3-202ENST00000406335 NEDD1Q8NHV4 660 aa24.97■■□□□ 1.59
RHBDD3-202ENST00000406335 EPB41L4AQ9HCS5 686 aaPredicted RBP24.97■■□□□ 1.59
RHBDD3-202ENST00000406335 GREB1LQ9C091 1923 aaPredicted RBP24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 PARP14Q460N5 1801 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 SOWAHBA6NEL2 793 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 CTAGE5O15320 804 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 ADAMTS19Q8TE59 1207 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 FSD1Q9BTV5 496 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 SEZ6LQ9BYH1 1024 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 LNPKQ9C0E8 428 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 KATNBL1Q9H079 304 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 NAPBQ9H115 298 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 RWDD1Q9H446 243 aaPredicted RBP24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 STX8Q9UNK0 236 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 MTMR7Q9Y216 660 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 SLC4A7Q9Y6M7 1214 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 CDH23Q9H251 3354 aa24.96■■□□□ 1.59
RHBDD3-202ENST00000406335 SMPD1P17405 629 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 PDE1AP54750 535 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 SNAP25P60880 206 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 ADGRE1Q14246 886 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 PPP4R3BQ5MIZ7 849 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 IQSEC1Q6DN90 963 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 B4GALNT3Q6L9W6 998 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 KIAA1211Q6ZU35 1233 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 SMC5Q8IY18 1101 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 SEC62Q99442 399 aaKnown RBP24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 TRPV6Q9H1D0 765 aa24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 GNEQ9Y223 722 aaKnown RBP24.95■■□□□ 1.58
RHBDD3-202ENST00000406335 UMODL1Q5DID0 1318 aa24.94■■□□□ 1.58
RHBDD3-202ENST00000406335 RABGGTBP53611 331 aa24.94■■□□□ 1.58
RHBDD3-202ENST00000406335 PSMC6P62333 389 aa24.94■■□□□ 1.58
RHBDD3-202ENST00000406335 NKX3-2P78367 333 aa24.94■■□□□ 1.58
RHBDD3-202ENST00000406335 PPP2R2DQ66LE6 453 aa24.94■■□□□ 1.58
RHBDD3-202ENST00000406335 NSMFQ6X4W1 530 aa24.94■■□□□ 1.58
RHBDD3-202ENST00000406335 KCTD1Q719H9 257 aa24.94■■□□□ 1.58
RHBDD3-202ENST00000406335 UHRF1Q96T88 793 aaPredicted RBP24.94■■□□□ 1.58
RHBDD3-202ENST00000406335 PDGFCQ9NRA1 345 aa24.94■■□□□ 1.58
RHBDD3-202ENST00000406335 PRUNE2Q8WUY3 3088 aa24.93■■□□□ 1.58
RHBDD3-202ENST00000406335 TSPY2A6NKD2 308 aa24.93■■□□□ 1.58
RHBDD3-202ENST00000406335 IRX6P78412 446 aaPredicted RBP24.93■■□□□ 1.58
RHBDD3-202ENST00000406335 SKIV2LQ15477 1246 aaKnown RBP24.93■■□□□ 1.58
RHBDD3-202ENST00000406335 FBXO16Q8IX29 292 aaPredicted RBP24.93■■□□□ 1.58
RHBDD3-202ENST00000406335 SLC43A3Q8NBI5 491 aa24.93■■□□□ 1.58
RHBDD3-202ENST00000406335 GMCL1Q96IK5 515 aa24.93■■□□□ 1.58
RHBDD3-202ENST00000406335 YBX2Q9Y2T7 364 aaKnown RBP24.93■■□□□ 1.58
RHBDD3-202ENST00000406335 ASTN1O14525 1302 aa24.92■■□□□ 1.58
RHBDD3-202ENST00000406335 B4GALT4O60513 344 aa24.92■■□□□ 1.58
RHBDD3-202ENST00000406335 PPARAQ07869 468 aa24.92■■□□□ 1.58
RHBDD3-202ENST00000406335 GPHNQ9NQX3 736 aaPredicted RBP24.92■■□□□ 1.58
RHBDD3-202ENST00000406335 CCPG1Q9ULG6 757 aa24.92■■□□□ 1.58
RHBDD3-202ENST00000406335 DDX49Q9Y6V7 483 aaKnown RBP24.92■■□□□ 1.58
RHBDD3-202ENST00000406335 PTGS1P23219 599 aa24.91■■□□□ 1.58
RHBDD3-202ENST00000406335 ZMYM1Q5SVZ6 1142 aa24.91■■□□□ 1.58
RHBDD3-202ENST00000406335 RCSD1Q6JBY9 416 aa24.91■■□□□ 1.58
RHBDD3-202ENST00000406335 SCLYQ96I15 445 aa24.91■■□□□ 1.58
RHBDD3-202ENST00000406335 NOC4LQ9BVI4 516 aaKnown RBP24.91■■□□□ 1.58
RHBDD3-202ENST00000406335 Q9Y3F1 56 aa24.91■■□□□ 1.58
RHBDD3-202ENST00000406335 ZNF536O15090 1300 aa24.9■■□□□ 1.58
RHBDD3-202ENST00000406335 SUPT20HL2P0C7V6 817 aa24.9■■□□□ 1.58
RHBDD3-202ENST00000406335 CCDC96Q2M329 555 aa24.9■■□□□ 1.58
RHBDD3-202ENST00000406335 MUM1L1Q5H9M0 696 aa24.9■■□□□ 1.58
RHBDD3-202ENST00000406335 CYP39A1Q9NYL5 469 aa24.9■■□□□ 1.58
RHBDD3-202ENST00000406335 SPTBN5Q9NRC6 3674 aaKnown RBP24.9■■□□□ 1.58
RHBDD3-202ENST00000406335 GRIN2DO15399 1336 aa24.89■■□□□ 1.58
RHBDD3-202ENST00000406335 MYL3P08590 195 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms