RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ZMYND8Q9ULU4 1186 aaPredicted RBP17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 ASTN1O14525 1302 aa17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 SYNRGQ9UMZ2 1314 aa17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 NFIBO00712 420 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 PGK1P00558 417 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 PARP1P09874 1014 aaKnown RBP17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 GOLGA8HP0CJ92 632 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 BMP8BP34820 402 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 ADCYAP1R1P41586 468 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 ATN1P54259 1190 aaPredicted RBP17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 CCDC144BQ3MJ40 725 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 C1orf53Q5VUE5 145 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 SLC39A5Q6ZMH5 540 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 MORC4Q8TE76 937 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 TSEN34Q9BSV6 310 aaKnown RBP17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 MAF1Q9H063 256 aa17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 ADD3Q9UEY8 706 aaKnown RBP17.39■□□□□ 0.37
SMIM11A-203ENST00000399299 E7EWF7 191 aa17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 MYCNP04198 464 aaPredicted RBP17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 CST5P28325 142 aaPredicted RBP17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 FXR1P51114 621 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 RTP1P59025 263 aa17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 BAATQ14032 418 aaPredicted RBP17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 RALYLQ86SE5 291 aaKnown RBP17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 KLHDC9Q8NEP7 349 aa17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 NCOA7Q8NI08 942 aa17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 CLEC4DQ8WXI8 215 aa17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 LENG1Q96BZ8 264 aaPredicted RBP17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 ESYT1Q9BSJ8 1104 aa17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 UBA5Q9GZZ9 404 aa17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 RBM8AQ9Y5S9 174 aaKnown RBP17.38■□□□□ 0.37
SMIM11A-203ENST00000399299 ADCY6O43306 1168 aa17.37■□□□□ 0.37
SMIM11A-203ENST00000399299 SYN1P17600 705 aa17.37■□□□□ 0.37
SMIM11A-203ENST00000399299 CDC37Q16543 378 aaPredicted RBP17.37■□□□□ 0.37
SMIM11A-203ENST00000399299 ADGRF4Q8IZF3 695 aa17.37■□□□□ 0.37
SMIM11A-203ENST00000399299 LSG1Q9H089 658 aaKnown RBP17.37■□□□□ 0.37
SMIM11A-203ENST00000399299 UPF3AQ9H1J1 476 aaKnown RBP17.37■□□□□ 0.37
SMIM11A-203ENST00000399299 CPVLQ9H3G5 476 aa17.37■□□□□ 0.37
SMIM11A-203ENST00000399299 TAF6LQ9Y6J9 622 aa17.37■□□□□ 0.37
SMIM11A-203ENST00000399299 LTBP2Q14767 1821 aa17.37■□□□□ 0.37
SMIM11A-203ENST00000399299 A0A1W2PQ45 241 aaPredicted RBP17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 A0A1W2PQY0 241 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 ERICH2A1L162 156 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 PTPDC1A2A3K4 754 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 MOXD2PA6NHM9 499 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 MAGEA10P43363 369 aaPredicted RBP17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 ALDH5A1P51649 535 aaPredicted RBP17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 GJA9P57773 515 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 NKX3-2P78367 333 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 CCSAPQ6IQ19 270 aaPredicted RBP17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 RNF207Q6ZRF8 634 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 STOX1Q6ZVD7 989 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 RGS22Q8NE09 1264 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 SPC25Q9HBM1 224 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 VTA1Q9NP79 307 aa17.36■□□□□ 0.37
SMIM11A-203ENST00000399299 IFIT3O14879 490 aaKnown RBP17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 ACLYP53396 1101 aa17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 RPS6P62753 249 aaKnown RBP17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 SLC30A10Q6XR72 485 aa17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 MB21D2Q8IYB1 491 aaPredicted RBP17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 PCSK9Q8NBP7 692 aaKnown RBP17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 FERMT2Q96AC1 680 aa17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 MTA3Q9BTC8 594 aa17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 JMJD4Q9H9V9 463 aa17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 MAD2L2Q9UI95 211 aa17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 ATP11BQ9Y2G3 1177 aa17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 ABCB11O95342 1321 aa17.35■□□□□ 0.37
SMIM11A-203ENST00000399299 PALM3A6NDB9 673 aaPredicted RBP17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 C6orf222P0C671 652 aaPredicted RBP17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 TNFAIP2Q03169 654 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 WTAPQ15007 396 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 KCNA10Q16322 511 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 QRICH1Q2TAL8 776 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 USH1GQ495M9 461 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 TRIM60Q495X7 471 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 IQSEC1Q6DN90 963 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 TAPT1Q6NXT6 567 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 STAG2Q8N3U4 1231 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 DNERQ8NFT8 737 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 NUP133Q8WUM0 1156 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 MTMR8Q96EF0 704 aa17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 PURBQ96QR8 312 aaKnown RBP17.34■□□□□ 0.37
SMIM11A-203ENST00000399299 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 MYADML2A6NDP7 307 aa17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 KLRF2D3W0D1 207 aa17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 DHX16O60231 1041 aaKnown RBP17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 CALML3P27482 149 aa17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 ANTXR2P58335 489 aa17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 GRM4Q14833 912 aa17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 FBXO11Q86XK2 927 aa17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 FBXO16Q8IX29 292 aaPredicted RBP17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 CCDC136Q96JN2 1154 aa17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 MPHOSPH6Q99547 160 aaKnown RBP17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 PRKAG2Q9UGJ0 569 aa17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 GNEQ9Y223 722 aaKnown RBP17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 Q9Y3F1 56 aa17.33■□□□□ 0.36
SMIM11A-203ENST00000399299 LAMA3Q16787 3333 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 ELP1O95163 1332 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms