RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CCNA1P78396 465 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 USH1GQ495M9 461 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 TYW1BQ6NUM6 668 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 OTOP1Q7RTM1 612 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 NCAPG2Q86XI2 1143 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 FBXO11Q86XK2 927 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 IL27Q8NEV9 243 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 USP6NLQ92738 828 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 COA7Q96BR5 231 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 RRP36Q96EU6 259 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 MROH8Q9H579 483 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 HOMER2Q9NSB8 354 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 GJD2Q9UKL4 321 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 GABRQQ9UN88 632 aa14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 V9GY48 417 aaPredicted RBP14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ZNFX1Q9P2E3 1918 aaKnown RBP14.38□□□□□ -0.11
HLA-DQB1-203ENST00000399082 TNPO2O14787 897 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PRPF3O43395 683 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 JAK2O60674 1132 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PTPREP23469 700 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 FCGRTP55899 365 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 GRB14Q14449 540 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 TKFCQ3LXA3 575 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 MORN1Q5T089 497 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 WWC2Q6AWC2 1192 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PLEKHH3Q7Z736 793 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 CCDC83Q8IWF9 413 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 NSUN7Q8NE18 718 aaKnown RBP14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 GPKOWQ92917 476 aaPredicted RBP eCLIP14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 TMX3Q96JJ7 454 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 TRERF1Q96PN7 1200 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 AMNQ9BXJ7 453 aa14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 RNF26Q9BY78 433 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 CTDP1Q9Y5B0 961 aaPredicted RBP14.37□□□□□ -0.11
HLA-DQB1-203ENST00000399082 FMNL1O95466 1100 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 FDPSP14324 419 aaKnown RBP14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 COPB2P35606 906 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PRKCZQ05513 592 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 WDR78Q5VTH9 848 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 CHST13Q8NET6 341 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ZSCAN31Q96LW9 406 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 FGD4Q96M96 766 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 AIFM3Q96NN9 605 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SLC26A6Q9BXS9 759 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ACAD9Q9H845 621 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 A1CFQ9NQ94 594 aaKnown RBP14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PRDM10Q9NQV6 1147 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SH2B1Q9NRF2 756 aaPredicted RBP14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PCDHA1Q9Y5I3 950 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ABCB11O95342 1321 aa14.36□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PLXNA1Q9UIW2 1896 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 DNAJC25-GNG10A0A024R161 153 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SLC15A5A6NIM6 579 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 STXBP3O00186 592 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 COBLO75128 1261 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ADORA2AP29274 412 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 GHRHRQ02643 423 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 KIF22Q14807 665 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SLC30A10Q6XR72 485 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ABRAQ8N0Z2 381 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SMARCC2Q8TAQ2 1214 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 CYP39A1Q9NYL5 469 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SEC63Q9UGP8 760 aaKnown RBP14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SRRDQ9UH36 339 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ASTN1O14525 1302 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 STK36Q9NRP7 1315 aa14.35□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PTPDC1A2A3K4 754 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 CPLX1O14810 134 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 ADAMTS3O15072 1205 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PGK2P07205 417 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SCG2P13521 617 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 MCM2P49736 904 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 NPLOC4Q8TAT6 608 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 SNX21Q969T3 373 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PURBQ96QR8 312 aaKnown RBP14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 MMP19Q99542 508 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 FBXO40Q9UH90 709 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 TRIM17Q9Y577 477 aa14.34□□□□□ -0.11
HLA-DQB1-203ENST00000399082 STRNO43815 780 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 IGHA2P01877 340 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 FCER1AP12319 257 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 FLT3LGP49771 235 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 CNTN2Q02246 1040 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 SSRP1Q08945 709 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 MAP2K5Q13163 448 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 CUL4AQ13619 759 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 NSMFQ6X4W1 530 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 HEATR3Q7Z4Q2 680 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 CTU1Q7Z7A3 348 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 SOCS4Q8WXH5 440 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 BARHL2Q9NY43 387 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 COL20A1Q9P218 1284 aa14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 MRPL11Q9Y3B7 192 aaKnown RBP14.33□□□□□ -0.12
HLA-DQB1-203ENST00000399082 LRRC37A2A6NM11 1700 aa14.32□□□□□ -0.12
HLA-DQB1-203ENST00000399082 CDKL5O76039 1030 aa14.32□□□□□ -0.12
HLA-DQB1-203ENST00000399082 GNRH1P01148 92 aa14.32□□□□□ -0.12
HLA-DQB1-203ENST00000399082 HOXC6P09630 235 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms