RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 LIMA1Q9UHB6 759 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 FTCDO95954 541 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 OR52Z1P0C646 297 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 KRT13P13646 458 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CCNE1P24864 410 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 HIBADHP31937 336 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 KIF11P52732 1056 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 RPS6KA1Q15418 735 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MSANTD4Q8NCY6 345 aa12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 DHTKD1Q96HY7 919 aaPredicted RBP12.32□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ESYT3A0FGR9 886 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 EZRP15311 586 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 POLR2FP61218 127 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 LRRC41Q15345 812 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MSL1Q68DK7 614 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TMTC3Q6ZXV5 915 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 NLRP3Q96P20 1036 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 THAP9Q9H5L6 903 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TCEAL9Q9UHQ7 104 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 NFU1Q9UMS0 254 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PCDHA13Q9Y5I0 950 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PLCG1P19174 1290 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 EIF6P56537 245 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 HERC4Q5GLZ8 1057 aaPredicted RBP12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 KRT25Q7Z3Z0 450 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 NBPF5PQ86XG9 351 aaPredicted RBP12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 BTG4Q9NY30 223 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ADAMTS2O95450 1211 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 KRT71Q3SY84 523 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TRMT1LQ7Z2T5 733 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 FBXL16Q8N461 479 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 LSM14BQ9BX40 385 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 HPCAL4Q9UM19 191 aa12.31□□□□□ -0.44
CSGALNACT1-202ENST00000397998 NCK2O43639 380 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 LDHBP07195 334 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CTNNA1P35221 906 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ASIC2Q16515 512 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 LRRC31Q6UY01 552 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ZSCAN29Q8IWY8 852 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MYCBPQ99417 103 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 LRRC1Q9BTT6 524 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ATP2C1P98194 919 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CALCRLQ16602 461 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PARP10Q53GL7 1025 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MMS22LQ6ZRQ5 1243 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TMEM139Q8IV31 216 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PIGBQ92521 554 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 LRRC45Q96CN5 670 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 SMARCAL1Q9NZC9 954 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 STIM2Q9P246 746 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TSKSQ9UJT2 592 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PCDHA4Q9UN74 947 aa12.3□□□□□ -0.44
CSGALNACT1-202ENST00000397998 GOLGA6L10A0A0M3HER8 536 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 KLRF2D3W0D1 207 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PICALMQ13492 652 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 REXO1Q8N1G1 1221 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 SLIT1O75093 1534 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ABL1P00519 1130 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 RUFY4Q6ZNE9 571 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 SH2D3CQ8N5H7 860 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 HSD3B7Q9H2F3 369 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ITIH6Q6UXX5 1313 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ABCC12Q96J65 1359 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MAP2K7O14733 419 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 SARSP49591 514 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CCNI2Q6ZMN8 369 aaPredicted RBP12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 DAAM2Q86T65 1068 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CCDC65Q8IXS2 484 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 LMBR1Q8WVP7 490 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CPVLQ9H3G5 476 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CAPN11Q9UMQ6 739 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 DUSP10Q9Y6W6 482 aa12.29□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ANO9A1A5B4 782 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TMEM110-MUSTN1A8MSY1 372 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 HGSO14964 777 aaPredicted RBP12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ARL6IP4Q66PJ3 421 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 NEK8Q86SG6 692 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CCDC25Q86WR0 208 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 ANKS4BQ8N8V4 417 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 SPATA4Q8NEY3 305 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 AGLP35573 1532 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 A0A087X0B3 334 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CETN3O15182 167 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 VIMP08670 466 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CYP2D6P10635 497 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 CCDC26Q8TAB7 109 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 HPS3Q969F9 1004 aa12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 JPH2Q9BR39 696 aaPredicted RBP12.28□□□□□ -0.44
CSGALNACT1-202ENST00000397998 DPH5Q9H2P9 285 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms