RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 CHTF18Q8WVB6 975 aa7.73□□□□□ -1.17
CEP290-202ENST00000397838 COL25A1Q9BXS0 654 aaPredicted RBP7.73□□□□□ -1.17
CEP290-202ENST00000397838 SSU72Q9NP77 194 aaKnown RBP7.73□□□□□ -1.17
CEP290-202ENST00000397838 DDX20Q9UHI6 824 aaKnown RBP7.73□□□□□ -1.17
CEP290-202ENST00000397838 ZEB2O60315 1214 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 RFPL1O75677 317 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 TIAF1O95411 115 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 SRGAP2CP0DJJ0 459 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 HOXC12P31275 282 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 ASPAP45381 313 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 BRD3Q15059 726 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 ACAD11Q709F0 780 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 UBE2R2Q712K3 238 aaPredicted RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 C11orf96Q7Z7L8 435 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 MTDHQ86UE4 582 aaKnown RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 CLRN3Q8NCR9 226 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 SVIPQ8NHG7 77 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 SYTL5Q8TDW5 730 aaPredicted RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 FUBP3Q96I24 572 aaKnown RBP eCLIP7.72□□□□□ -1.17
CEP290-202ENST00000397838 PHF20Q9BVI0 1012 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 MS4A5Q9H3V2 200 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 LUC7LQ9NQ29 371 aaKnown RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 C11orf95C9JLR9 678 aaPredicted RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 LRIG2O94898 1065 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 CKMP06732 381 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 PF4V1P10720 104 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 GRIK1P39086 918 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 CTSKP43235 329 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 HNRNPUQ00839 825 aaKnown RBP eCLIP7.72□□□□□ -1.17
CEP290-202ENST00000397838 DHX8Q14562 1220 aaKnown RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 HDGFL2Q7Z4V5 671 aaPredicted RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 C2CD4AQ8NCU7 369 aaPredicted RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 FRS2Q8WU20 508 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 GSX1Q9H4S2 264 aaPredicted RBP7.72□□□□□ -1.17
CEP290-202ENST00000397838 PIDD1Q9HB75 910 aa7.72□□□□□ -1.17
CEP290-202ENST00000397838 LCE2BO14633 110 aa7.71□□□□□ -1.17
CEP290-202ENST00000397838 GFOD2Q3B7J2 385 aa7.71□□□□□ -1.17
CEP290-202ENST00000397838 ATP13A4Q4VNC1 1196 aa7.71□□□□□ -1.17
CEP290-202ENST00000397838 HP1BP3Q5SSJ5 553 aaPredicted RBP7.71□□□□□ -1.17
CEP290-202ENST00000397838 GPAT2Q6NUI2 795 aa7.71□□□□□ -1.17
CEP290-202ENST00000397838 EPM2AIP1Q7L775 607 aaPredicted RBP7.71□□□□□ -1.17
CEP290-202ENST00000397838 SAMD3Q8N6K7 520 aa7.71□□□□□ -1.17
CEP290-202ENST00000397838 LRGUKQ96M69 825 aa7.71□□□□□ -1.17
CEP290-202ENST00000397838 E2F8A0AVK6 867 aa7.71□□□□□ -1.18
CEP290-202ENST00000397838 CCDC189A1A4V9 331 aa7.71□□□□□ -1.18
CEP290-202ENST00000397838 ATP2A2P16615 1042 aaKnown RBP7.71□□□□□ -1.18
CEP290-202ENST00000397838 FLT3P36888 993 aa7.71□□□□□ -1.18
CEP290-202ENST00000397838 PPIL6Q8IXY8 311 aa7.71□□□□□ -1.18
CEP290-202ENST00000397838 C12orf50Q8NA57 414 aaPredicted RBP7.71□□□□□ -1.18
CEP290-202ENST00000397838 EDARADDQ8WWZ3 215 aa7.71□□□□□ -1.18
CEP290-202ENST00000397838 COPS5Q92905 334 aa7.71□□□□□ -1.18
CEP290-202ENST00000397838 TAGLN3Q9UI15 199 aa7.71□□□□□ -1.18
CEP290-202ENST00000397838 INTUQ9ULD6 942 aa7.71□□□□□ -1.18
CEP290-202ENST00000397838 SHISA3A0PJX4 238 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 IFNGR1P15260 489 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 HDAC1Q13547 482 aaPredicted RBP7.7□□□□□ -1.18
CEP290-202ENST00000397838 CRTC3Q6UUV7 619 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 ORAI3Q9BRQ5 295 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 SLC12A5Q9H2X9 1139 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 C14orf119Q9NWQ9 140 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 PRAMEF1O95521 474 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 YBX3P16989 372 aaKnown RBP eCLIP7.7□□□□□ -1.18
CEP290-202ENST00000397838 AMPD2Q01433 879 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 GRM3Q14832 879 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 CREB3L3Q68CJ9 461 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 CRACR2BQ8N4Y2 399 aaPredicted RBP7.7□□□□□ -1.18
CEP290-202ENST00000397838 BTBD6Q96KE9 485 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 PTPRHQ9HD43 1115 aa7.7□□□□□ -1.18
CEP290-202ENST00000397838 NSFL1CQ9UNZ2 370 aaKnown RBP7.7□□□□□ -1.18
CEP290-202ENST00000397838 ARVCFO00192 962 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 PCDHGA12O60330 932 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 RAB6AP20340 208 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 ZC3H7AQ8IWR0 971 aaKnown RBP7.69□□□□□ -1.18
CEP290-202ENST00000397838 MFSD2AQ8NA29 543 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 KCT2Q8NC54 265 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 DCAF4Q8WV16 495 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 SUGCTQ9HAC7 445 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 DAGLAQ9Y4D2 1042 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 PCDHGA9Q9Y5G4 932 aaKnown RBP7.69□□□□□ -1.18
CEP290-202ENST00000397838 PCDHGA8Q9Y5G5 932 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 PCDHGA7Q9Y5G6 932 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 PCDHGA6Q9Y5G7 932 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 PCDHGA3Q9Y5H0 932 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 PCDHGA2Q9Y5H1 932 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 LCHNA4D1U4 455 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 H2AFYO75367 372 aaKnown RBP7.69□□□□□ -1.18
CEP290-202ENST00000397838 HOXB4P17483 251 aaPredicted RBP7.69□□□□□ -1.18
CEP290-202ENST00000397838 CPA6Q8N4T0 437 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 PCDH19Q8TAB3 1148 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 NPLOC4Q8TAT6 608 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 CAMKK2Q96RR4 588 aa7.69□□□□□ -1.18
CEP290-202ENST00000397838 PPARGC1AQ9UBK2 798 aaKnown RBP7.69□□□□□ -1.18
CEP290-202ENST00000397838 A0A087WZG4 1122 aa7.68□□□□□ -1.18
CEP290-202ENST00000397838 AQP7O14520 342 aa7.68□□□□□ -1.18
CEP290-202ENST00000397838 CT47B1P0C2W7 299 aaPredicted RBP7.68□□□□□ -1.18
CEP290-202ENST00000397838 SAFB2Q14151 953 aaKnown RBP eCLIP7.68□□□□□ -1.18
CEP290-202ENST00000397838 SART3Q15020 963 aaKnown RBP7.68□□□□□ -1.18
CEP290-202ENST00000397838 TMEM177Q53S58 311 aa7.68□□□□□ -1.18
CEP290-202ENST00000397838 SMG8Q8ND04 991 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms