RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 AKR1B1P15121 316 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 PDE6AP16499 860 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 TNFAIP2Q03169 654 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
NEDD9-203ENST00000397378 SLC9C2Q5TAH2 1124 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
NEDD9-203ENST00000397378 TLK2Q86UE8 772 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 CLEC10AQ8IUN9 316 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 ADHFE1Q8IWW8 467 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 REPS2Q8NFH8 660 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 SDR42E1Q8WUS8 393 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 ATOH1Q92858 354 aaPredicted RBP11.35□□□□□ -0.59
NEDD9-203ENST00000397378 PBXIP1Q96AQ6 731 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 ALDH8A1Q9H2A2 487 aaPredicted RBP11.35□□□□□ -0.59
NEDD9-203ENST00000397378 TRMT13Q9NUP7 481 aaKnown RBP11.35□□□□□ -0.59
NEDD9-203ENST00000397378 PPP1R9AQ9ULJ8 1098 aa11.35□□□□□ -0.59
NEDD9-203ENST00000397378 KMT2EQ8IZD2 1858 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 DNAJC25-GNG10A0A024R161 153 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 TCRBV5S4A2TA0A5A2 114 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 RAD21O60216 631 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 CYP2D6P10635 497 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 RFC2P35250 354 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 NKX3-2P78367 333 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 HERC4Q5GLZ8 1057 aaPredicted RBP11.34□□□□□ -0.59
NEDD9-203ENST00000397378 ZKSCAN2Q63HK3 967 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 SNRNP48Q6IEG0 339 aaKnown RBP11.34□□□□□ -0.59
NEDD9-203ENST00000397378 ARMCX2Q7L311 632 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 TMCO2Q7Z6W1 182 aaPredicted RBP11.34□□□□□ -0.59
NEDD9-203ENST00000397378 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 DYNLL2Q96FJ2 89 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 TGS1Q96RS0 853 aaKnown RBP11.34□□□□□ -0.59
NEDD9-203ENST00000397378 CRBNQ96SW2 442 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 AP5M1Q9H0R1 490 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 C1orf115Q9H7X2 142 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 ATP8A2Q9NTI2 1148 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 ASTN1O14525 1302 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 TNKSO95271 1327 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 ZNF532Q9HCE3 1301 aa11.34□□□□□ -0.59
NEDD9-203ENST00000397378 BAIAP3O94812 1187 aa11.33□□□□□ -0.6
NEDD9-203ENST00000397378 ID4P47928 161 aa11.33□□□□□ -0.6
NEDD9-203ENST00000397378 PKN1Q16512 942 aa11.33□□□□□ -0.6
NEDD9-203ENST00000397378 BMP8AQ7Z5Y6 402 aa11.33□□□□□ -0.6
NEDD9-203ENST00000397378 AACSQ86V21 672 aa11.33□□□□□ -0.6
NEDD9-203ENST00000397378 LCORLQ8N3X6 602 aa11.33□□□□□ -0.6
NEDD9-203ENST00000397378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.33□□□□□ -0.6
NEDD9-203ENST00000397378 TEX13BQ9BXU2 312 aa11.33□□□□□ -0.6
NEDD9-203ENST00000397378 KANSL2Q9H9L4 492 aa11.33□□□□□ -0.6
NEDD9-203ENST00000397378 GOPCQ9HD26 462 aa11.33□□□□□ -0.6
NEDD9-203ENST00000397378 TRIOO75962 3097 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 DCHS1Q96JQ0 3298 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 SOWAHBA6NEL2 793 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 TMEM221A6NGB7 291 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 M0R296 226 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 DYNC1LI2O43237 492 aaPredicted RBP11.32□□□□□ -0.6
NEDD9-203ENST00000397378 IQCF3P0C7M6 154 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 EEF2P13639 858 aaKnown RBP11.32□□□□□ -0.6
NEDD9-203ENST00000397378 PTGS1P23219 599 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 CDK8P49336 464 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 ERVK-21P61565 698 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 FAM47CQ5HY64 1035 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 C12orf60Q5U649 245 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 C16orf86Q6ZW13 317 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.32□□□□□ -0.6
NEDD9-203ENST00000397378 RNF135Q8IUD6 432 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 CCDC144CPQ8IYA2 1237 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 ANKRD35Q8N283 1001 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 RETREG2Q8NC44 543 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 EDAQ92838 391 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 POP1Q99575 1024 aaKnown RBP11.32□□□□□ -0.6
NEDD9-203ENST00000397378 IRF2BPLQ9H1B7 796 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 RIPK3Q9Y572 518 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 TECTAO75443 2155 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 PLXNA3P51805 1871 aa11.32□□□□□ -0.6
NEDD9-203ENST00000397378 SPTBN4Q9H254 2564 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 KRT37O76014 449 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 WDR5P61964 334 aaKnown RBP11.31□□□□□ -0.6
NEDD9-203ENST00000397378 PTPROQ16827 1216 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 TRIM67Q6ZTA4 783 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 FBXO22Q8NEZ5 403 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
NEDD9-203ENST00000397378 KATNBL1Q9H079 304 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 ARMT1Q9H993 441 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 CTNNA3Q9UI47 895 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 GNEQ9Y223 722 aaKnown RBP11.31□□□□□ -0.6
NEDD9-203ENST00000397378 EXOC6BQ9Y2D4 811 aa11.31□□□□□ -0.6
NEDD9-203ENST00000397378 TET1Q8NFU7 2136 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 LINC01553A4QN01 128 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 GOLIM4O00461 696 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 ATP2A1O14983 1001 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 DEFB103AP81534 67 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 TIGD5Q53EQ6 642 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 HSP90AB4PQ58FF6 505 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 FAM83BQ5T0W9 1011 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 ASCL5Q7RTU5 278 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 AMOTL1Q8IY63 956 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 CPXCR1Q8N123 301 aa11.3□□□□□ -0.6
NEDD9-203ENST00000397378 FBXL6Q8N531 539 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms