RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
NUP98-205ENST00000397007 GPR142Q7Z601 462 aa12.31□□□□□ -0.44
NUP98-205ENST00000397007 MICU3Q86XE3 530 aa12.31□□□□□ -0.44
NUP98-205ENST00000397007 SIP14410 1827 aa12.31□□□□□ -0.44
NUP98-205ENST00000397007 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
NUP98-205ENST00000397007 CYP39A1Q9NYL5 469 aa12.31□□□□□ -0.44
NUP98-205ENST00000397007 MAPK4P31152 587 aa12.3□□□□□ -0.44
NUP98-205ENST00000397007 OLFML2BQ68BL8 750 aa12.3□□□□□ -0.44
NUP98-205ENST00000397007 CMTR1Q8N1G2 835 aaKnown RBP12.3□□□□□ -0.44
NUP98-205ENST00000397007 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
NUP98-205ENST00000397007 CPA4Q9UI42 421 aa12.3□□□□□ -0.44
NUP98-205ENST00000397007 SLC15A5A6NIM6 579 aa12.3□□□□□ -0.44
NUP98-205ENST00000397007 MBOAT7Q96N66 472 aa12.3□□□□□ -0.44
NUP98-205ENST00000397007 LOXHD1Q8IVV2 1947 aa12.3□□□□□ -0.44
NUP98-205ENST00000397007 RBM47A0AV96 593 aaKnown RBP12.3□□□□□ -0.44
NUP98-205ENST00000397007 COBLO75128 1261 aa12.3□□□□□ -0.44
NUP98-205ENST00000397007 HSPA1AP0DMV8 641 aaKnown RBP12.3□□□□□ -0.44
NUP98-205ENST00000397007 HSPA1BP0DMV9 641 aaKnown RBP12.3□□□□□ -0.44
NUP98-205ENST00000397007 LARP6Q9BRS8 491 aaKnown RBP12.3□□□□□ -0.44
NUP98-205ENST00000397007 FLRT1Q9NZU1 646 aa12.3□□□□□ -0.44
NUP98-205ENST00000397007 CCDC196A0A1B0GTZ2 297 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 ERCC3P19447 782 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 STAT3P40763 770 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 CTCFLQ8NI51 663 aaPredicted RBP12.29□□□□□ -0.44
NUP98-205ENST00000397007 A1CFQ9NQ94 594 aaKnown RBP12.29□□□□□ -0.44
NUP98-205ENST00000397007 NFIBO00712 420 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 STRNO43815 780 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 TRPA1O75762 1119 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
NUP98-205ENST00000397007 SP3Q02447 781 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 KIFC2Q96AC6 838 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
NUP98-205ENST00000397007 RIC8AQ9NPQ8 531 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 RBM27Q9P2N5 1060 aaKnown RBP12.29□□□□□ -0.44
NUP98-205ENST00000397007 SCG2P13521 617 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 SNAP25P60880 206 aa12.29□□□□□ -0.44
NUP98-205ENST00000397007 MSL3Q8N5Y2 521 aaKnown RBP12.29□□□□□ -0.44
NUP98-205ENST00000397007 SOWAHBA6NEL2 793 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 NECAB1Q8N987 351 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 EFCC1Q9HA90 598 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 TNRC18O15417 2968 aaPredicted RBP12.28□□□□□ -0.44
NUP98-205ENST00000397007 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 K7ELQ4 463 aaPredicted RBP12.28□□□□□ -0.44
NUP98-205ENST00000397007 JAK2O60674 1132 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 PRMT2P55345 433 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 RAB11FIP4Q86YS3 637 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 AMNQ9BXJ7 453 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 UPF2Q9HAU5 1272 aaKnown RBP12.28□□□□□ -0.44
NUP98-205ENST00000397007 LTBP2Q14767 1821 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 PFASO15067 1338 aa12.28□□□□□ -0.44
NUP98-205ENST00000397007 FKTNO75072 461 aa12.27□□□□□ -0.44
NUP98-205ENST00000397007 DEXIO95424 95 aa12.27□□□□□ -0.44
NUP98-205ENST00000397007 ATP2B2Q01814 1243 aa12.27□□□□□ -0.44
NUP98-205ENST00000397007 SNRNP48Q6IEG0 339 aaKnown RBP12.27□□□□□ -0.44
NUP98-205ENST00000397007 NPLOC4Q8TAT6 608 aa12.27□□□□□ -0.44
NUP98-205ENST00000397007 PXYLP1Q8TE99 480 aa12.27□□□□□ -0.44
NUP98-205ENST00000397007 PHKBQ93100 1093 aa12.27□□□□□ -0.44
NUP98-205ENST00000397007 MORC2Q9Y6X9 1032 aaPredicted RBP12.27□□□□□ -0.44
NUP98-205ENST00000397007 TCHHQ07283 1943 aa12.27□□□□□ -0.44
NUP98-205ENST00000397007 ST18O60284 1047 aa12.27□□□□□ -0.45
NUP98-205ENST00000397007 ZBED4O75132 1171 aa12.27□□□□□ -0.45
NUP98-205ENST00000397007 SLC30A10Q6XR72 485 aa12.27□□□□□ -0.45
NUP98-205ENST00000397007 OTOP1Q7RTM1 612 aa12.27□□□□□ -0.45
NUP98-205ENST00000397007 GABRQQ9UN88 632 aa12.27□□□□□ -0.45
NUP98-205ENST00000397007 SYNGAP1Q96PV0 1343 aa12.27□□□□□ -0.45
NUP98-205ENST00000397007 PTPDC1A2A3K4 754 aa12.27□□□□□ -0.45
NUP98-205ENST00000397007 CCDC144CPQ8IYA2 1237 aa12.27□□□□□ -0.45
NUP98-205ENST00000397007 TBC1D5Q92609 795 aa12.27□□□□□ -0.45
NUP98-205ENST00000397007 SCN10AQ9Y5Y9 1956 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 RGS20O76081 388 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 CCT2P78371 535 aaKnown RBP12.26□□□□□ -0.45
NUP98-205ENST00000397007 CCDC96Q2M329 555 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 SYTL5Q8TDW5 730 aaPredicted RBP12.26□□□□□ -0.45
NUP98-205ENST00000397007 TRERF1Q96PN7 1200 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 ACAD9Q9H845 621 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 SRRDQ9UH36 339 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 FBXO40Q9UH90 709 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 FBXO11Q86XK2 927 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 RRP36Q96EU6 259 aaKnown RBP12.26□□□□□ -0.45
NUP98-205ENST00000397007 AIFM3Q96NN9 605 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 CYP3A4P08684 503 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 U2AF2P26368 475 aaKnown RBP eCLIP12.26□□□□□ -0.452e-7■■■■□ 22.1
NUP98-205ENST00000397007 CTCFP49711 727 aaPredicted RBP12.26□□□□□ -0.45
NUP98-205ENST00000397007 MAP2K5Q13163 448 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 NFXL1Q6ZNB6 911 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 PLEKHH3Q7Z736 793 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 DNERQ8NFT8 737 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 SOCS4Q8WXH5 440 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
NUP98-205ENST00000397007 PTPN22Q9Y2R2 807 aa12.26□□□□□ -0.45
NUP98-205ENST00000397007 V9GY48 417 aaPredicted RBP12.26□□□□□ -0.45
NUP98-205ENST00000397007 CD99L2Q8TCZ2 262 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 ERO1AQ96HE7 468 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 MAML3Q96JK9 1138 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 RNF146Q9NTX7 359 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 NRBP1Q9UHY1 535 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 TANC1Q9C0D5 1861 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 NUP133Q8WUM0 1156 aa12.25□□□□□ -0.45
NUP98-205ENST00000397007 LENG9Q96B70 501 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms