RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NIP7Q9Y221 180 aaKnown RBP eCLIP26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 COL1A1P02452 1464 aaPredicted RBP26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 CICQ96RK0 1608 aaPredicted RBP26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 ANO9A1A5B4 782 aa26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 H0YHG0 523 aa26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 MYO1FO00160 1098 aa26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 CCDC172P0C7W6 258 aa26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 MATR3P43243 847 aaKnown RBP eCLIP26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 B4GALNT4Q76KP1 1039 aa26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 HPS3Q969F9 1004 aa26.73■■□□□ 1.87
CSNK1E-203ENST00000396832 BMP15O95972 392 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 KLRK1P26718 216 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 PDCLQ13371 301 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 CCDC152Q4G0S7 254 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 TTMPQ5BVD1 217 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 KRT26Q7Z3Y9 468 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 OTUD6BQ8N6M0 293 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 TMEM60Q9H2L4 133 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 SMARCAL1Q9NZC9 954 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 SETQ01105 290 aaPredicted RBP26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 CABS1Q96KC9 395 aa26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 RBM28Q9NW13 759 aaKnown RBP26.72■■□□□ 1.87
CSNK1E-203ENST00000396832 KIAA0754O94854 1291 aa26.71■■□□□ 1.87
CSNK1E-203ENST00000396832 PLEKP08567 350 aaPredicted RBP26.71■■□□□ 1.87
CSNK1E-203ENST00000396832 MMGT1Q8N4V1 131 aa26.71■■□□□ 1.87
CSNK1E-203ENST00000396832 CYLC1P35663 651 aaPredicted RBP26.71■■□□□ 1.87
CSNK1E-203ENST00000396832 FNTAP49354 379 aa26.71■■□□□ 1.87
CSNK1E-203ENST00000396832 SKOR1P84550 965 aa26.71■■□□□ 1.87
CSNK1E-203ENST00000396832 LRRC15Q8TF66 581 aa26.71■■□□□ 1.87
CSNK1E-203ENST00000396832 RUFY1Q96T51 708 aa26.71■■□□□ 1.87
CSNK1E-203ENST00000396832 ANKRD36CQ5JPF3 1778 aa26.71■■□□□ 1.87
CSNK1E-203ENST00000396832 SLC7A5Q01650 507 aa26.7■■□□□ 1.87
CSNK1E-203ENST00000396832 NAALADL2Q58DX5 795 aa26.7■■□□□ 1.87
CSNK1E-203ENST00000396832 CREG2Q8IUH2 290 aa26.7■■□□□ 1.87
CSNK1E-203ENST00000396832 STAG2Q8N3U4 1231 aa26.7■■□□□ 1.87
CSNK1E-203ENST00000396832 TSEN2Q8NCE0 465 aaKnown RBP26.7■■□□□ 1.87
CSNK1E-203ENST00000396832 ACSBG1Q96GR2 724 aa26.7■■□□□ 1.87
CSNK1E-203ENST00000396832 JPH2Q9BR39 696 aaPredicted RBP26.7■■□□□ 1.87
CSNK1E-203ENST00000396832 DISC1Q9NRI5 854 aa26.7■■□□□ 1.87
CSNK1E-203ENST00000396832 DUOX1Q9NRD9 1551 aa26.7■■□□□ 1.87
CSNK1E-203ENST00000396832 TSPY2A6NKD2 308 aa26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 LGALS16A8MUM7 142 aa26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 H7C1D1 291 aa26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 IPO7O95373 1038 aaKnown RBP26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 EPB41P11171 864 aaKnown RBP26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 RCAN1P53805 252 aa26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 INF2Q27J81 1249 aa26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 TYW1BQ6NUM6 668 aa26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 C3orf67Q6ZVT6 689 aa26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 CPVLQ9H3G5 476 aa26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 ITGB4P16144 1822 aa26.7■■□□□ 1.86
CSNK1E-203ENST00000396832 CCDC178Q5BJE1 867 aa26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 NHEJ1Q9H9Q4 299 aaPredicted RBP26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 A0A1W2PQC6 194 aa26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 SMIM5Q71RC9 77 aa26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 ADSSL1Q8N142 457 aa26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 EHD2Q9NZN4 543 aa26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 MEA1Q16626 185 aa26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 ZNF507Q8TCN5 953 aa26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 MAGEC2Q9UBF1 373 aaPredicted RBP26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 CEP83Q9Y592 693 aa26.69■■□□□ 1.86
CSNK1E-203ENST00000396832 MEFVO15553 781 aaPredicted RBP26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 CXCR5P32302 372 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 ATP1A2P50993 1020 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 ALS2CLQ60I27 953 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 RMND1Q9NWS8 449 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 SNX12Q9UMY4 172 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 MYH10P35580 1976 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 A6NNZ2 444 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 ZEB2O60315 1214 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 HSF2BPO75031 334 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 TUBB8Q3ZCM7 444 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 CSGALNACT2Q8N6G5 542 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 POLD4Q9HCU8 107 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 ANAPC4Q9UJX5 808 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 ARAP2Q8WZ64 1704 aa26.68■■□□□ 1.86
CSNK1E-203ENST00000396832 FSBPO95073 299 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 BICDL1Q6ZP65 573 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 SH2D3CQ8N5H7 860 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 PURBQ96QR8 312 aaKnown RBP26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 TUBGCP2Q9BSJ2 902 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 ZNHIT6Q9NWK9 470 aaKnown RBP26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 DONSONQ9NYP3 566 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 ATXN2Q99700 1313 aaKnown RBP26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 PLCH1Q4KWH8 1693 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 IL6STP40189 918 aaPredicted RBP26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 EPHB4P54760 987 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 KIF5AQ12840 1032 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 KCTD16Q68DU8 428 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 FNBP4Q8N3X1 1017 aaPredicted RBP26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 SPATA4Q8NEY3 305 aa26.67■■□□□ 1.86
CSNK1E-203ENST00000396832 DNA2P51530 1060 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 CCDC24Q8N4L8 307 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 TFCP2L1Q9NZI6 479 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 ERVV-1B6SEH8 477 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 FCER1AP12319 257 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 UBA7P41226 1012 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 ATP2B2Q01814 1243 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 TBC1D8BQ0IIM8 1120 aa26.66■■□□□ 1.86
CSNK1E-203ENST00000396832 PFKFB3Q16875 520 aaPredicted RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms