RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CRNKL1Q9BZJ0 848 aaKnown RBP10.45□□□□□ -0.74
NDE1-201ENST00000396354 XDHP47989 1333 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 CCDC194A0A1B0GVG4 234 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 UFL1O94874 794 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 SERPINB2P05120 415 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 IDEP14735 1019 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 UBA7P41226 1012 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 PRCPP42785 496 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 TFAP4Q01664 338 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 SF3B2Q13435 895 aaKnown RBP10.44□□□□□ -0.74
NDE1-201ENST00000396354 IL17AQ16552 155 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 TSR1Q2NL82 804 aaKnown RBP10.44□□□□□ -0.74
NDE1-201ENST00000396354 C12orf60Q5U649 245 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 KIFC2Q96AC6 838 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 CAMKK2Q96RR4 588 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 F8W031 263 aaPredicted RBP10.44□□□□□ -0.74
NDE1-201ENST00000396354 MFAP3LO75121 409 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 CCDC122Q5T0U0 273 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 FOXR1Q6PIV2 292 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 DYMQ7RTS9 669 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 KRT26Q7Z3Y9 468 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 ANKRD20A12PQ8NF67 263 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 MTA3Q9BTC8 594 aa10.44□□□□□ -0.74
NDE1-201ENST00000396354 POLRMTO00411 1230 aaKnown RBP10.43□□□□□ -0.74
NDE1-201ENST00000396354 PRPF3O43395 683 aaKnown RBP10.43□□□□□ -0.74
NDE1-201ENST00000396354 LDHBP07195 334 aaKnown RBP10.43□□□□□ -0.74
NDE1-201ENST00000396354 PAK1Q13153 545 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 CLEC10AQ8IUN9 316 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 IQUBQ8NA54 791 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 MTRQ99707 1265 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 ZHX3Q9H4I2 956 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 CD209Q9NNX6 404 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 FAM207AQ9NSI2 230 aaPredicted RBP10.43□□□□□ -0.74
NDE1-201ENST00000396354 ADD3Q9UEY8 706 aaKnown RBP10.43□□□□□ -0.74
NDE1-201ENST00000396354 CTAGE15A4D2H0 777 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 CYTH3O43739 400 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 CTAGE8P0CG41 777 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 RCAN1P53805 252 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
NDE1-201ENST00000396354 SBK1Q52WX2 424 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 HSP90B2PQ58FF3 399 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 CTAGE6Q86UF2 777 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 CTAGE4Q8IX94 777 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 DHX37Q8IY37 1157 aaKnown RBP10.43□□□□□ -0.74
NDE1-201ENST00000396354 TMTC2Q8N394 836 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 TANGO6Q9C0B7 1094 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 ATP8A2Q9NTI2 1148 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 AGPAT5Q9NUQ2 364 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 EHD2Q9NZN4 543 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 LCMT1Q9UIC8 334 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 ADAM21Q9UKJ8 722 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 COL11A2P13942 1736 aaPredicted RBP10.43□□□□□ -0.74
NDE1-201ENST00000396354 A0A1B0GTH6 734 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 TTC26A0AVF1 554 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 PPP1R3GB7ZBB8 358 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 TXLNAP40222 546 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 GPR161Q8N6U8 529 aaKnown RBP10.43□□□□□ -0.74
NDE1-201ENST00000396354 TMEM60Q9H2L4 133 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 KAT14Q9H8E8 782 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 TBC1D7Q9P0N9 293 aa10.43□□□□□ -0.74
NDE1-201ENST00000396354 LRRC37AA6NMS7 1700 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 ZRANB2O95218 330 aaKnown RBP eCLIP10.42□□□□□ -0.74
NDE1-201ENST00000396354 MTIF2P46199 727 aaKnown RBP10.42□□□□□ -0.74
NDE1-201ENST00000396354 BAG6P46379 1132 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 COPB1P53618 953 aaKnown RBP10.42□□□□□ -0.74
NDE1-201ENST00000396354 TBX2Q13207 712 aaPredicted RBP10.42□□□□□ -0.74
NDE1-201ENST00000396354 ZSCAN26Q16670 478 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 UBA5Q9GZZ9 404 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 ARPP21Q9UBL0 812 aaPredicted RBP10.42□□□□□ -0.74
NDE1-201ENST00000396354 RSPH14Q9UHP6 348 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 RPN1P04843 607 aaKnown RBP10.42□□□□□ -0.74
NDE1-201ENST00000396354 PLEKP08567 350 aaPredicted RBP10.42□□□□□ -0.74
NDE1-201ENST00000396354 RHBDL3P58872 404 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 ASIC1P78348 528 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 KANK3Q6NY19 840 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 SRGAP1Q7Z6B7 1085 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 TBC1D16Q8TBP0 767 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 FUT8Q9BYC5 575 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 ABHD10Q9NUJ1 306 aa10.42□□□□□ -0.74
NDE1-201ENST00000396354 DDAH1O94760 285 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 FCER1AP12319 257 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 SCG2P13521 617 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 RASA1P20936 1047 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 TECP42680 631 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 BTDP43251 543 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 GPS2Q13227 327 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 RPGRQ92834 1020 aaKnown RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 NAPGQ99747 312 aaPredicted RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 SLC39A2Q9NP94 309 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 MAGEC2Q9UBF1 373 aaPredicted RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 MAD2L2Q9UI95 211 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 CDC23Q9UJX2 597 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 LEMD3Q9Y2U8 911 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 ROBO3Q96MS0 1386 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 CCNT1O60563 726 aaKnown RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 ATP1A1P05023 1023 aaKnown RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 CYP2C19P33261 490 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 SARSP49591 514 aaKnown RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 SLC7A5Q01650 507 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms