RNA–Protein interactions for RNA: ENST00000395560.7

UPP1-202, Transcript of uridine phosphorylase 1, humanhuman

TSL 2

Gene UPP1, Length 955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP1-202ENST00000395560 IGF2BP3O00425 579 aaKnown RBP eCLIP20.56■□□□□ 0.88
UPP1-202ENST00000395560 STX6O43752 255 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 PPP1R11O60927 126 aaPredicted RBP20.56■□□□□ 0.88
UPP1-202ENST00000395560 GNA11P29992 359 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 COPB2P35606 906 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 DDIT3P35638 169 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 SNAP25P60880 206 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 NUCB2P80303 420 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 TMEM132BQ14DG7 1078 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 SAFBQ15424 915 aaKnown RBP eCLIP20.56■□□□□ 0.88
UPP1-202ENST00000395560 GPKOWQ92917 476 aaPredicted RBP eCLIP20.56■□□□□ 0.88
UPP1-202ENST00000395560 AIFM3Q96NN9 605 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 C6orf50Q9HD87 102 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 SAGE1Q9NXZ1 904 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 VPS54Q9P1Q0 977 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 ZNF214Q9UL59 606 aaPredicted RBP20.56■□□□□ 0.88
UPP1-202ENST00000395560 CCPG1Q9ULG6 757 aa20.56■□□□□ 0.88
UPP1-202ENST00000395560 STAT3P40763 770 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 NLRP5P59047 1200 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 KRT40Q6A162 431 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 CPXCR1Q8N123 301 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 SAMD3Q8N6K7 520 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 BICD2Q8TD16 824 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 COA7Q96BR5 231 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 PHF20Q9BVI0 1012 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 ZMYND12Q9H0C1 365 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 RAVER2Q9HCJ3 691 aaKnown RBP20.55■□□□□ 0.88
UPP1-202ENST00000395560 BRMS1Q9HCU9 246 aa20.55■□□□□ 0.88
UPP1-202ENST00000395560 COL11A1P12107 1806 aaPredicted RBP20.55■□□□□ 0.88
UPP1-202ENST00000395560 SLC25A27O95847 323 aa20.54■□□□□ 0.88
UPP1-202ENST00000395560 MMP1P03956 469 aa20.54■□□□□ 0.88
UPP1-202ENST00000395560 CYP2C8P10632 490 aa20.54■□□□□ 0.88
UPP1-202ENST00000395560 MRPL12P52815 198 aaKnown RBP20.54■□□□□ 0.88
UPP1-202ENST00000395560 TAF1CQ15572 869 aaPredicted RBP20.54■□□□□ 0.88
UPP1-202ENST00000395560 USH1GQ495M9 461 aa20.54■□□□□ 0.88
UPP1-202ENST00000395560 AGBL1Q96MI9 1066 aa20.54■□□□□ 0.88
UPP1-202ENST00000395560 ZFYVE28Q9HCC9 887 aa20.54■□□□□ 0.88
UPP1-202ENST00000395560 RBPJLQ9UBG7 517 aa20.54■□□□□ 0.88
UPP1-202ENST00000395560 SMCO2A6NFE2 343 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 MLLT1Q03111 559 aaPredicted RBP20.53■□□□□ 0.88
UPP1-202ENST00000395560 MCTP2Q6DN12 878 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 SNRNP48Q6IEG0 339 aaKnown RBP20.53■□□□□ 0.88
UPP1-202ENST00000395560 MCF2L2Q86YR7 1114 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 RIOX2Q8IUF8 465 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 DAGLBQ8NCG7 672 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 GPRC5AQ8NFJ5 357 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 SPATC1LQ9H0A9 340 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 MAP3K20Q9NYL2 800 aaKnown RBP20.53■□□□□ 0.88
UPP1-202ENST00000395560 CHMP5Q9NZZ3 219 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 BTBD7Q9P203 1132 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 MORF4L1Q9UBU8 362 aa20.53■□□□□ 0.88
UPP1-202ENST00000395560 VPS37CA5D8V6 355 aaPredicted RBP20.52■□□□□ 0.88
UPP1-202ENST00000395560 ADCY7P51828 1080 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 CCNA1P78396 465 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 PLS1Q14651 629 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 TYW1BQ6NUM6 668 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 CHST13Q8NET6 341 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 CUL5Q93034 780 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 PAGR1Q9BTK6 254 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 PSTPIP2Q9H939 334 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 RIC8AQ9NPQ8 531 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 FBXO40Q9UH90 709 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 PCDHA4Q9UN74 947 aa20.52■□□□□ 0.88
UPP1-202ENST00000395560 CNMDO75829 334 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 ALAS1P13196 640 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 KRT2P35908 639 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 ERVK-9P63128 1117 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 ERVK-24P63145 666 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 FAM110CQ1W6H9 321 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 POTEEQ6S8J3 1075 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 BLIDQ8IZY5 108 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 SHCBP1Q8NEM2 672 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 FOXP1Q9H334 677 aaPredicted RBP20.51■□□□□ 0.87
UPP1-202ENST00000395560 R3HDMLQ9H3Y0 253 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 GJB4Q9NTQ9 266 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 KCNJ14Q9UNX9 436 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 MTMR6Q9Y217 621 aa20.51■□□□□ 0.87
UPP1-202ENST00000395560 TLR2O60603 784 aa20.5■□□□□ 0.87
UPP1-202ENST00000395560 FOSBP53539 338 aa20.5■□□□□ 0.87
UPP1-202ENST00000395560 SOX10P56693 466 aa20.5■□□□□ 0.87
UPP1-202ENST00000395560 GUCY1B3Q02153 619 aa20.5■□□□□ 0.87
UPP1-202ENST00000395560 SHISA4Q96DD7 197 aa20.5■□□□□ 0.87
UPP1-202ENST00000395560 ZSCAN16Q9H4T2 348 aaPredicted RBP20.5■□□□□ 0.87
UPP1-202ENST00000395560 MROH8Q9H579 483 aa20.5■□□□□ 0.87
UPP1-202ENST00000395560 RNF146Q9NTX7 359 aa20.5■□□□□ 0.87
UPP1-202ENST00000395560 ADGRA2Q96PE1 1338 aa20.5■□□□□ 0.87
UPP1-202ENST00000395560 PIK3CDO00329 1044 aa20.49■□□□□ 0.87
UPP1-202ENST00000395560 BRD1O95696 1058 aa20.49■□□□□ 0.87
UPP1-202ENST00000395560 TBC1D8O95759 1140 aa20.49■□□□□ 0.87
UPP1-202ENST00000395560 ZSCAN22P10073 491 aaPredicted RBP20.49■□□□□ 0.87
UPP1-202ENST00000395560 GHRHRQ02643 423 aa20.49■□□□□ 0.87
UPP1-202ENST00000395560 GNL2Q13823 731 aaKnown RBP20.49■□□□□ 0.87
UPP1-202ENST00000395560 DIS3L2Q8IYB7 885 aaKnown RBP20.49■□□□□ 0.87
UPP1-202ENST00000395560 ANKRD13CQ8N6S4 541 aa20.49■□□□□ 0.87
UPP1-202ENST00000395560 CFHR5Q9BXR6 569 aa20.49■□□□□ 0.87
UPP1-202ENST00000395560 MOV10L1Q9BXT6 1211 aaKnown RBP20.49■□□□□ 0.87
UPP1-202ENST00000395560 ACAD9Q9H845 621 aa20.49■□□□□ 0.87
UPP1-202ENST00000395560 TXNRD2Q9NNW7 524 aa20.49■□□□□ 0.87
UPP1-202ENST00000395560 U2AF2P26368 475 aaKnown RBP eCLIP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms