RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 SRPK1Q96SB4 655 aaKnown RBP6.8□□□□□ -1.32
CASC3-202ENST00000394114 UBA5Q9GZZ9 404 aa6.8□□□□□ -1.32
CASC3-202ENST00000394114 ATP8A2Q9NTI2 1148 aa6.8□□□□□ -1.32
CASC3-202ENST00000394114 SIRPGQ9P1W8 387 aa6.8□□□□□ -1.32
CASC3-202ENST00000394114 PCDHAC2Q9Y5I4 1007 aa6.8□□□□□ -1.32
CASC3-202ENST00000394114 SLC12A7Q9Y666 1083 aa6.8□□□□□ -1.32
CASC3-202ENST00000394114 TNKSO95271 1327 aa6.8□□□□□ -1.32
CASC3-202ENST00000394114 NAV1Q8NEY1 1877 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 LAMB1P07942 1786 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 KIAA1551Q9HCM1 1747 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 FAM205AQ6ZU69 1335 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 WDR19Q8NEZ3 1342 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 GOLGA8AA7E2F4 631 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 ACTN4O43707 911 aaKnown RBP6.79□□□□□ -1.32
CASC3-202ENST00000394114 ECE2O60344 883 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 CCNYL3P0C7X3 344 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 PLCD1P51178 756 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 SART3Q15020 963 aaKnown RBP6.79□□□□□ -1.32
CASC3-202ENST00000394114 CAVIN1Q6NZI2 390 aaKnown RBP6.79□□□□□ -1.32
CASC3-202ENST00000394114 FBXL16Q8N461 479 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 GPT2Q8TD30 523 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 EYA3Q99504 573 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 LLPHQ9BRT6 129 aaKnown RBP6.79□□□□□ -1.32
CASC3-202ENST00000394114 ZNF408Q9H9D4 720 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 ANAPC4Q9UJX5 808 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 DAGLAQ9Y4D2 1042 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 MYH1P12882 1939 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 POLR3DP05423 398 aaPredicted RBP6.79□□□□□ -1.32
CASC3-202ENST00000394114 CEBPZQ03701 1054 aaKnown RBP6.79□□□□□ -1.32
CASC3-202ENST00000394114 TTLL6Q8N841 843 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 C7orf43Q8WVR3 580 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 JDP2Q8WYK2 163 aa6.79□□□□□ -1.32
CASC3-202ENST00000394114 ORC3Q9UBD5 711 aaPredicted RBP6.79□□□□□ -1.32
CASC3-202ENST00000394114 ARPP21Q9UBL0 812 aaPredicted RBP6.79□□□□□ -1.32
CASC3-202ENST00000394114 C10orf71Q711Q0 1435 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 GPR75-ASB3A0A0A6YYF3 556 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 PPIP5K2O43314 1243 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 DHX16O60231 1041 aaKnown RBP6.78□□□□□ -1.32
CASC3-202ENST00000394114 RBM5P52756 815 aaKnown RBP eCLIP6.78□□□□□ -1.32
CASC3-202ENST00000394114 CACNB3P54284 484 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 PPP4CP60510 307 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 FAM193AP78312 1265 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 HMGN5P82970 282 aaKnown RBP6.78□□□□□ -1.32
CASC3-202ENST00000394114 SGMS1Q86VZ5 419 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 ENAHQ8N8S7 591 aaPredicted RBP6.78□□□□□ -1.32
CASC3-202ENST00000394114 ZSCAN10Q96SZ4 725 aaPredicted RBP6.78□□□□□ -1.32
CASC3-202ENST00000394114 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.78□□□□□ -1.32
CASC3-202ENST00000394114 SEPT9Q9UHD8 586 aaPredicted RBP6.78□□□□□ -1.32
CASC3-202ENST00000394114 FLT1P17948 1338 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 TSPY2A6NKD2 308 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 LIFRP42702 1097 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 RHBDL3P58872 404 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 PDE4BQ07343 736 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 KLHL40Q2TBA0 621 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 SKOR2Q2VWA4 1001 aaPredicted RBP6.78□□□□□ -1.32
CASC3-202ENST00000394114 COX20Q5RI15 118 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 C12orf60Q5U649 245 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 SYNE3Q6ZMZ3 975 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 SAMD7Q7Z3H4 446 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 SEC16BQ96JE7 1060 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 ZBED2Q9BTP6 218 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 NEUROD4Q9HD90 331 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 ZNF277Q9NRM2 450 aaPredicted RBP6.78□□□□□ -1.32
CASC3-202ENST00000394114 ATP6V1DQ9Y5K8 247 aa6.78□□□□□ -1.32
CASC3-202ENST00000394114 hCG_1642624A0A1W2PR95 340 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 SLC3A2P08195 630 aaKnown RBP6.77□□□□□ -1.33
CASC3-202ENST00000394114 SLURP2P0DP57 97 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 KCNA3P22001 575 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 EIF4BP23588 611 aaKnown RBP6.77□□□□□ -1.33
CASC3-202ENST00000394114 NBPF20Q3BBV1 942 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 IFIT1BQ5T764 474 aaKnown RBP6.77□□□□□ -1.33
CASC3-202ENST00000394114 PODNQ7Z5L7 613 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 IQCA1Q86XH1 822 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 AMOTL1Q8IY63 956 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 SLC16A10Q8TF71 515 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 C8orf76Q96K31 380 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 SLC26A6Q9BXS9 759 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 FTOQ9C0B1 505 aaKnown RBP eCLIP6.77□□□□□ -1.33
CASC3-202ENST00000394114 MKNK2Q9HBH9 465 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 GEMIN8Q9NWZ8 242 aaKnown RBP6.77□□□□□ -1.33
CASC3-202ENST00000394114 SNTG2Q9NY99 539 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.77□□□□□ -1.33
CASC3-202ENST00000394114 MYH6P13533 1939 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 ECM29Q5VYK3 1845 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 GAKO14976 1311 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 RAD17O75943 681 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 PTMSP20962 102 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 TFAP4Q01664 338 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 CBLBQ13191 982 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 RASA3Q14644 834 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 SEC23AQ15436 765 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 RTN1Q16799 776 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 SBK1Q52WX2 424 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 CSRNP1Q96S65 589 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 DDX4Q9NQI0 724 aaKnown RBP6.77□□□□□ -1.33
CASC3-202ENST00000394114 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.77□□□□□ -1.336e-6■■■■■ 48.1
CASC3-202ENST00000394114 USP40Q9NVE5 1235 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 RABGEF1Q9UJ41 708 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 KIF3AQ9Y496 699 aa6.77□□□□□ -1.33
CASC3-202ENST00000394114 TMEM229AB2RXF0 380 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms