RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 DMGDHQ9UI17 866 aaKnown RBP13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 N4BP2Q86UW6 1770 aaPredicted RBP13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 TARSL2A2RTX5 802 aaKnown RBP13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 CCNT1O60563 726 aaKnown RBP13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 AMPD2Q01433 879 aa13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 NNTQ13423 1086 aa13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 GBP6Q6ZN66 633 aa13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 CEP57Q86XR8 500 aa13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 DZIP1Q86YF9 867 aaKnown RBP13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 MYCBPQ99417 103 aaPredicted RBP13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 THAP9Q9H5L6 903 aa13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 PCDHA13Q9Y5I0 950 aa13.11□□□□□ -0.31
R3HDM2-203ENST00000393811 E7EVH7 732 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 PMS1P54277 932 aaKnown RBP13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 SH3RF1Q7Z6J0 888 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 SRBD1Q8N5C6 995 aaKnown RBP13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 SPATA4Q8NEY3 305 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 REXO2Q9Y3B8 237 aaKnown RBP13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 PLEKP08567 350 aaPredicted RBP13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 TXKP42681 527 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 TRAPPC10P48553 1259 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 KIF11P52732 1056 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 PKN1Q16512 942 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 HDAC7Q8WUI4 952 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 CCDC114Q96M63 670 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 NFU1Q9UMS0 254 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 AFDNP55196 1824 aaKnown RBP13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 ANO9A1A5B4 782 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 TECP42680 631 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 CHRNDQ07001 517 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 MCTP2Q6DN12 878 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 HPS3Q969F9 1004 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 STIM2Q9P246 746 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 TACC3Q9Y6A5 838 aa13.1□□□□□ -0.31
R3HDM2-203ENST00000393811 LOC102724159A0A0B4J2E5 919 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 EXOC5O00471 708 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 MAP2K2P36507 400 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 PAK2Q13177 524 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 PWP2Q15269 919 aaKnown RBP13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 CEP85LQ5SZL2 805 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 PIGBQ92521 554 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 A0A1W2PQC6 194 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 DDAH1O94760 285 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 HEXIM1O94992 359 aaKnown RBP13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 CCNE1P24864 410 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 TFAP4Q01664 338 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 RAPGEF1Q13905 1077 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 CNNM4Q6P4Q7 775 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 SNX12Q9UMY4 172 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 KRT14P02533 472 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 PLCG1P19174 1290 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 IFFO1Q0D2I5 559 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 PAPD7Q5XG87 772 aaKnown RBP13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 CCDC121Q6ZUS5 278 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 RETREG2Q8NC44 543 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 UIMC1Q96RL1 719 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 OSBPL9Q96SU4 736 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 KRT12Q99456 494 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 LMO7Q8WWI1 1683 aa13.09□□□□□ -0.31
R3HDM2-203ENST00000393811 TRAF5O00463 557 aa13.08□□□□□ -0.31
R3HDM2-203ENST00000393811 FTCDO95954 541 aa13.08□□□□□ -0.31
R3HDM2-203ENST00000393811 GOLGA8HP0CJ92 632 aa13.08□□□□□ -0.31
R3HDM2-203ENST00000393811 IFT88Q13099 833 aa13.08□□□□□ -0.31
R3HDM2-203ENST00000393811 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.31
R3HDM2-203ENST00000393811 SV2BQ7L1I2 683 aa13.08□□□□□ -0.31
R3HDM2-203ENST00000393811 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.31
R3HDM2-203ENST00000393811 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.31
R3HDM2-203ENST00000393811 WDR17Q8IZU2 1322 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 FAM170AA1A519 330 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 RCCD1A6NED2 376 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 LRRC10BA6NIK2 292 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 GUCY2CP25092 1073 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 ARL8AQ96BM9 186 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 RPS6KA5O75582 802 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 FCER1AP12319 257 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 EHHADHQ08426 723 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 ANKRD40Q6AI12 368 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 DNAJC7Q99615 494 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 CAPN6Q9Y6Q1 641 aa13.08□□□□□ -0.32
R3HDM2-203ENST00000393811 SRGNP10124 158 aa13.07□□□□□ -0.32
R3HDM2-203ENST00000393811 AARSP49588 968 aaKnown RBP eCLIP13.07□□□□□ -0.32
R3HDM2-203ENST00000393811 RCAN1P53805 252 aa13.07□□□□□ -0.32
R3HDM2-203ENST00000393811 TMEM266Q2M3C6 531 aa13.07□□□□□ -0.32
R3HDM2-203ENST00000393811 ARL6IP4Q66PJ3 421 aaKnown RBP13.07□□□□□ -0.32
R3HDM2-203ENST00000393811 CCDC84Q86UT8 332 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms