RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 RALGDSQ12967 914 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 TBCCQ15814 346 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 TRIM16LQ309B1 348 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SYCP2LQ5T4T6 812 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 KANK3Q6NY19 840 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 MAEAQ7L5Y9 396 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 CNGA4Q8IV77 575 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SULF1Q8IWU6 871 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 FAM161BQ96MY7 647 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 NAPBQ9H115 298 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SNX25Q9H3E2 840 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 POLE3Q9NRF9 147 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 EHD2Q9NZN4 543 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 MPP6Q9NZW5 540 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SLC4A4Q9Y6R1 1079 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 KLF18A0A0U1RQI7 1052 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 TAF4O00268 1085 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 NFIBO00712 420 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 DEAF1O75398 565 aaPredicted RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 SNUPNO95149 360 aaKnown RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 MOCS3O95396 460 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 PRKAR2BP31323 418 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SEMA3FQ13275 785 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 PLA2G4EQ3MJ16 856 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 CFAP221Q4G0U5 840 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 ANO5Q75V66 913 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 TMEM110Q86TL2 294 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 AFAP1Q8N556 730 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 RAPGEF4Q8WZA2 1011 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 BRF1Q92994 677 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 CCDC124Q96CT7 223 aaKnown RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 TUBGCP3Q96CW5 907 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 RERGLQ9H628 205 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 ETAA1Q9NY74 926 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 UBE4BO95155 1302 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 CCDC85CA6NKD9 419 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 LRPAP1P30533 357 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 PEX5P50542 639 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 PDE6CP51160 858 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SMTNP53814 917 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 HDAC4P56524 1084 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 C16orf72Q14CZ0 275 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 ARL13BQ3SXY8 428 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 HS1BP3Q53T59 392 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 Q6ZUG5 572 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 KRT27Q7Z3Y8 459 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SRGAP1Q7Z6B7 1085 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 NUTM2AQ8IVF1 878 aaPredicted RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 MARCH10Q8NA82 808 aaPredicted RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 WDR48Q8TAF3 677 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 RIN3Q8TB24 985 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 ZNF653Q96CK0 615 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 NAF1Q96HR8 494 aaKnown RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 VPS39Q96JC1 886 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 CLMNQ96JQ2 1002 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 FRMD6Q96NE9 622 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 OLFM3Q96PB7 478 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 TESK2Q96S53 571 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 BBS2Q9BXC9 721 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.56□□□□□ -1.84
PHF3-202ENST00000393387 PPP2R3BQ9Y5P8 575 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 DHX29Q7Z478 1369 aaKnown RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 LRRIQ4A6NIV6 560 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 CHUKO15111 745 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SCAMP1O15126 338 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 GPC4O75487 556 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 TUBB4AP04350 444 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 GNAT1P11488 350 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SLC9A1P19634 815 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 CTCFP49711 727 aaPredicted RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 POLR2FP61218 127 aaKnown RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 ABATP80404 500 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 RPS6KA1Q15418 735 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 DAB2IPQ5VWQ8 1189 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 NEK5Q6P3R8 708 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 PGBD2Q6P3X8 592 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 PEX26Q7Z412 305 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 SZRD1Q7Z422 152 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 TTC30BQ8N4P2 665 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 ZNF579Q8NAF0 562 aaKnown RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 ICA1LQ8NDH6 482 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 USP33Q8TEY7 942 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 RSAD2Q8WXG1 361 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 ARL8AQ96BM9 186 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 ALKBH8Q96BT7 664 aaKnown RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 FTOQ9C0B1 505 aaKnown RBP eCLIP3.56□□□□□ -1.84
PHF3-202ENST00000393387 RAD21L1Q9H4I0 556 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 ACTR5Q9H9F9 607 aaPredicted RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 SNRKQ9NRH2 765 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 KLC4Q9NSK0 619 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 TSR3Q9UJK0 312 aaKnown RBP3.56□□□□□ -1.84
PHF3-202ENST00000393387 SOX13Q9UN79 622 aa3.56□□□□□ -1.84
PHF3-202ENST00000393387 CNTLNQ9NXG0 1405 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 TTLL13PA6NNM8 815 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 GOLGA8TH3BQL2 631 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 MYO1FO00160 1098 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 P4HA2O15460 535 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 SMNDC1O75940 238 aaKnown RBP eCLIP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms