RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 SLC1A4P43007 532 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 MRPL12P52815 198 aaKnown RBP21.55■■□□□ 1.04
ERCC2-203ENST00000391944 ABCB5Q2M3G0 1257 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 CDKAL1Q5VV42 579 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 RSBN1LQ6PCB5 846 aaPredicted RBP21.55■■□□□ 1.04
ERCC2-203ENST00000391944 IGSF22Q8N9C0 903 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 MYRIPQ8NFW9 859 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 CUL5Q93034 780 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 MAGEF1Q9HAY2 307 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 KCNJ6P48051 423 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 ICA1Q05084 483 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 SEMA3FQ13275 785 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 NR1I3Q14994 352 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 POTEDQ86YR6 584 aa21.55■■□□□ 1.04
ERCC2-203ENST00000391944 C16orf45Q96MC5 204 aaPredicted RBP21.55■■□□□ 1.04
ERCC2-203ENST00000391944 KCNA3P22001 575 aa21.54■■□□□ 1.04
ERCC2-203ENST00000391944 TECP42680 631 aa21.54■■□□□ 1.04
ERCC2-203ENST00000391944 TBX2Q13207 712 aaPredicted RBP21.54■■□□□ 1.04
ERCC2-203ENST00000391944 APTXQ7Z2E3 356 aaKnown RBP21.54■■□□□ 1.04
ERCC2-203ENST00000391944 A0A1B0GTH6 734 aa21.54■■□□□ 1.04
ERCC2-203ENST00000391944 VIL1P09327 827 aaKnown RBP21.54■■□□□ 1.04
ERCC2-203ENST00000391944 BAG6P46379 1132 aa21.54■■□□□ 1.04
ERCC2-203ENST00000391944 KCNB1Q14721 858 aa21.54■■□□□ 1.04
ERCC2-203ENST00000391944 CALCRLQ16602 461 aa21.54■■□□□ 1.04
ERCC2-203ENST00000391944 CCAR2Q8N163 923 aaKnown RBP21.54■■□□□ 1.04
ERCC2-203ENST00000391944 RWDD2AQ9UIY3 292 aa21.54■■□□□ 1.04
ERCC2-203ENST00000391944 USP27XA6NNY8 438 aa21.53■■□□□ 1.04
ERCC2-203ENST00000391944 PLCG1P19174 1290 aa21.53■■□□□ 1.04
ERCC2-203ENST00000391944 GMCL1P1Q8NEA9 526 aa21.53■■□□□ 1.04
ERCC2-203ENST00000391944 LRRC15Q8TF66 581 aa21.53■■□□□ 1.04
ERCC2-203ENST00000391944 GMLQ99445 158 aa21.53■■□□□ 1.04
ERCC2-203ENST00000391944 PLIN2Q99541 437 aa21.53■■□□□ 1.04
ERCC2-203ENST00000391944 PSTPIP2Q9H939 334 aa21.53■■□□□ 1.04
ERCC2-203ENST00000391944 SPDYE2BA6NHP3 402 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 F5H6K3 240 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 GDF11O95390 407 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 SPDYE6P0CI01 402 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 TNNT1P13805 278 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 KLRC3Q07444 240 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 UBE2SQ16763 222 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 SPECC1LQ69YQ0 1117 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 PPP4R3AQ6IN85 833 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 CCDC112Q8NEF3 446 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 SLC16A10Q8TF71 515 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 CSRNP1Q96S65 589 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 GLT8D2Q9H1C3 349 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 TMX1Q9H3N1 280 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 CTNND2Q9UQB3 1225 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 RAD21O60216 631 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 TDP2O95551 362 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 DPEP1P16444 411 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 TXKP42681 527 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 TNNI2P48788 182 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 FXR2P51116 673 aaKnown RBP eCLIP21.52■■□□□ 1.048e-7■■■■□ 25.7
ERCC2-203ENST00000391944 SF3B2Q13435 895 aaKnown RBP21.52■■□□□ 1.04
ERCC2-203ENST00000391944 QRICH1Q2TAL8 776 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.04
ERCC2-203ENST00000391944 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
ERCC2-203ENST00000391944 MMTAG2Q9BU76 263 aaKnown RBP21.52■■□□□ 1.04
ERCC2-203ENST00000391944 PSMD14O00487 310 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 SLC37A4O43826 429 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 KLRC4O43908 158 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 PAK1Q13153 545 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 DEFB132Q7Z7B7 95 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 GMCL1Q96IK5 515 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 CTAGE1Q96RT6 745 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 TMOD2Q9NZR1 351 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 RAD17O75943 681 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 PTPN21Q16825 1174 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 NYAP1Q6ZVC0 841 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 VPS33BQ9H267 617 aa21.51■■□□□ 1.03
ERCC2-203ENST00000391944 HERC5Q9UII4 1024 aaKnown RBP21.51■■□□□ 1.03
ERCC2-203ENST00000391944 DYNC1I1O14576 645 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 RHOBTB3O94955 611 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 PRCPP42785 496 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 JAG1P78504 1218 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 PDIA5Q14554 519 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 KMT5BQ4FZB7 885 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 E4F1Q66K89 784 aaPredicted RBP21.5■■□□□ 1.03
ERCC2-203ENST00000391944 ZNF277Q9NRM2 450 aaPredicted RBP21.5■■□□□ 1.03
ERCC2-203ENST00000391944 ADD3Q9UEY8 706 aaKnown RBP21.5■■□□□ 1.03
ERCC2-203ENST00000391944 HDAC9Q9UKV0 1011 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 ATF5Q9Y2D1 282 aaPredicted RBP21.5■■□□□ 1.03
ERCC2-203ENST00000391944 GDAQ9Y2T3 454 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 ARFGEF1Q9Y6D6 1849 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 PSDA5PKW4 1024 aaPredicted RBP21.5■■□□□ 1.03
ERCC2-203ENST00000391944 GH2P01242 217 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 GTF2F1P35269 517 aaKnown RBP eCLIP21.5■■□□□ 1.035e-7■■■■■ 32.9
ERCC2-203ENST00000391944 TMEM266Q2M3C6 531 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 NELFBQ8WX92 580 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 CALML4Q96GE6 196 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 TRMT1Q9NXH9 659 aaKnown RBP21.5■■□□□ 1.03
ERCC2-203ENST00000391944 PCDHA1Q9Y5I3 950 aa21.5■■□□□ 1.03
ERCC2-203ENST00000391944 RRP1BQ14684 758 aaKnown RBP21.49■■□□□ 1.03
ERCC2-203ENST00000391944 DLGAP5Q15398 846 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 CDC37Q16543 378 aaPredicted RBP21.49■■□□□ 1.03
ERCC2-203ENST00000391944 ADSSL1Q8N142 457 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 OGFOD1Q8N543 542 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 LRWD1Q9UFC0 647 aa21.49■■□□□ 1.03
ERCC2-203ENST00000391944 TCP10L2B9ZVM9 353 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms