RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 TRPV1Q8NER1 839 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 NUP133Q8WUM0 1156 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 PNMA2Q9UL42 364 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 SLC12A7Q9Y666 1083 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 NID2Q14112 1375 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 BAZ2BQ9UIF8 2168 aaKnown RBP17.23■□□□□ 0.35
VCX3B-201ENST00000381029 LCTP09848 1927 aa17.23■□□□□ 0.35
VCX3B-201ENST00000381029 MKI67P46013 3256 aaKnown RBP17.23■□□□□ 0.35
VCX3B-201ENST00000381029 ZBTB5O15062 677 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 SLC34A2O95436 690 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 CALM1P0DP23 149 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 CALM2P0DP24 149 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 CALM3P0DP25 149 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 CYBAP13498 195 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 PRKAR2AP13861 404 aaKnown RBP17.22■□□□□ 0.35
VCX3B-201ENST00000381029 UBXN2AP68543 259 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 MAMDC4Q6UXC1 1216 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 NFXL1Q6ZNB6 911 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 TMTC3Q6ZXV5 915 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 ZNF467Q7Z7K2 595 aaPredicted RBP17.22■□□□□ 0.35
VCX3B-201ENST00000381029 RAB11FIP4Q86YS3 637 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 SHISA4Q96DD7 197 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 PIGSQ96S52 555 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 VAT1LQ9HCJ6 419 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 CYP39A1Q9NYL5 469 aa17.22■□□□□ 0.35
VCX3B-201ENST00000381029 RPTORQ8N122 1335 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 SOWAHBA6NEL2 793 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 GJB1P08034 283 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 CYP2C19P33261 490 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 SLC4A3P48751 1232 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 SOX10P56693 466 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 CNTN2Q02246 1040 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 GHRHRQ02643 423 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 RGS22Q8NE09 1264 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 CTCFLQ8NI51 663 aaPredicted RBP17.21■□□□□ 0.35
VCX3B-201ENST00000381029 BRF1Q92994 677 aa17.21■□□□□ 0.35
VCX3B-201ENST00000381029 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
VCX3B-201ENST00000381029 KLF18A0A0U1RQI7 1052 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 MYCP01106 439 aaPredicted RBP17.2■□□□□ 0.34
VCX3B-201ENST00000381029 CDC27P30260 824 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 KIF5BP33176 963 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 CCDC144CPQ8IYA2 1237 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 CMTR1Q8N1G2 835 aaKnown RBP17.2■□□□□ 0.34
VCX3B-201ENST00000381029 ANKRD35Q8N283 1001 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 MSL3Q8N5Y2 521 aaKnown RBP17.2■□□□□ 0.34
VCX3B-201ENST00000381029 TBC1D5Q92609 795 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 PURBQ96QR8 312 aaKnown RBP17.2■□□□□ 0.34
VCX3B-201ENST00000381029 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 TINF2Q9BSI4 451 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 MAF1Q9H063 256 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 CRISPLD2Q9H0B8 497 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 SLC5A4Q9NY91 659 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 BIN2Q9UBW5 565 aaPredicted RBP17.2■□□□□ 0.34
VCX3B-201ENST00000381029 PLXNA1Q9UIW2 1896 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 PFASO15067 1338 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 ABCB11O95342 1321 aa17.2■□□□□ 0.34
VCX3B-201ENST00000381029 PNMA6FA0A0J9YX94 578 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 ZBTB43O43298 467 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
VCX3B-201ENST00000381029 SNAI1O95863 264 aaPredicted RBP17.19■□□□□ 0.34
VCX3B-201ENST00000381029 CCND3P30281 292 aaPredicted RBP17.19■□□□□ 0.34
VCX3B-201ENST00000381029 GNAQP50148 359 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 BAATQ14032 418 aaPredicted RBP17.19■□□□□ 0.34
VCX3B-201ENST00000381029 USH1GQ495M9 461 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 LHX8Q68G74 356 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 FBXO11Q86XK2 927 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 MORC4Q8TE76 937 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 DDX11Q96FC9 970 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 KIF2CQ99661 725 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 AMNQ9BXJ7 453 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 KATNBL1Q9H079 304 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.19■□□□□ 0.34
VCX3B-201ENST00000381029 RNF208Q9H0X6 261 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 ALDH8A1Q9H2A2 487 aaPredicted RBP17.19■□□□□ 0.34
VCX3B-201ENST00000381029 CYP46A1Q9Y6A2 500 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 CNTNAP5Q8WYK1 1306 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
VCX3B-201ENST00000381029 ZNF865P0CJ78 1059 aaPredicted RBP17.18■□□□□ 0.34
VCX3B-201ENST00000381029 EN2P19622 333 aaPredicted RBP17.18■□□□□ 0.34
VCX3B-201ENST00000381029 GJA8P48165 433 aa17.18■□□□□ 0.34
VCX3B-201ENST00000381029 RPS6P62753 249 aaKnown RBP17.18■□□□□ 0.34
VCX3B-201ENST00000381029 MFSD14CQ5VZR4 134 aa17.18■□□□□ 0.34
VCX3B-201ENST00000381029 SLC30A10Q6XR72 485 aa17.18■□□□□ 0.34
VCX3B-201ENST00000381029 UBE2Q1Q7Z7E8 422 aa17.18■□□□□ 0.34
VCX3B-201ENST00000381029 HMX1Q9NP08 348 aaPredicted RBP17.18■□□□□ 0.34
VCX3B-201ENST00000381029 COL20A1Q9P218 1284 aa17.18■□□□□ 0.34
VCX3B-201ENST00000381029 NRBP1Q9UHY1 535 aa17.18■□□□□ 0.34
VCX3B-201ENST00000381029 POTEB2H3BUK9 544 aa17.17■□□□□ 0.34
VCX3B-201ENST00000381029 DHX16O60231 1041 aaKnown RBP17.17■□□□□ 0.34
VCX3B-201ENST00000381029 PDIA3P30101 505 aaKnown RBP17.17■□□□□ 0.34
VCX3B-201ENST00000381029 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
VCX3B-201ENST00000381029 NTRK3Q16288 839 aa17.17■□□□□ 0.34
VCX3B-201ENST00000381029 RTN1Q16799 776 aa17.17■□□□□ 0.34
VCX3B-201ENST00000381029 PRAMEF19Q5SWL8 479 aa17.17■□□□□ 0.34
VCX3B-201ENST00000381029 NSMFQ6X4W1 530 aa17.17■□□□□ 0.34
VCX3B-201ENST00000381029 HOMER1Q86YM7 354 aa17.17■□□□□ 0.34
VCX3B-201ENST00000381029 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
VCX3B-201ENST00000381029 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms