RNA–Protein interactions for RNA: ENST00000378600.7

DDB2-202, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene DDB2, Length 717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-202ENST00000378600 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 COBLO75128 1261 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 INHAP05111 366 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 ELNP15502 786 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 COL9A3Q14050 684 aaPredicted RBP13.18□□□□□ -0.3
DDB2-202ENST00000378600 ANKRD1Q15327 319 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 RTN1Q16799 776 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 QRICH1Q2TAL8 776 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 MICU3Q86XE3 530 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 NPLOC4Q8TAT6 608 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 TRIB2Q92519 343 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 BRF1Q92994 677 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 RRP36Q96EU6 259 aaKnown RBP13.18□□□□□ -0.3
DDB2-202ENST00000378600 MAML3Q96JK9 1138 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 TCEANC2Q96MN5 208 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 MYL10Q9BUA6 226 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 VAT1LQ9HCJ6 419 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 HMX1Q9NP08 348 aaPredicted RBP13.18□□□□□ -0.3
DDB2-202ENST00000378600 A1CFQ9NQ94 594 aaKnown RBP13.18□□□□□ -0.3
DDB2-202ENST00000378600 HOMER2Q9NSB8 354 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
DDB2-202ENST00000378600 NRBP1Q9UHY1 535 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 HTTP42858 3142 aa13.18□□□□□ -0.3
DDB2-202ENST00000378600 LCTP09848 1927 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 SEC24BO95487 1268 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 IGHA2P01877 340 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 SNAP25P60880 206 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 MAP3K21Q5TCX8 1036 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 MAMDC4Q6UXC1 1216 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 ZNF274Q96GC6 653 aaPredicted RBP13.17□□□□□ -0.3
DDB2-202ENST00000378600 MPHOSPH6Q99547 160 aaKnown RBP13.17□□□□□ -0.3
DDB2-202ENST00000378600 CPVLQ9H3G5 476 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 PDRG1Q9NUG6 133 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 CYP39A1Q9NYL5 469 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 RBM27Q9P2N5 1060 aaKnown RBP13.17□□□□□ -0.3
DDB2-202ENST00000378600 ADD3Q9UEY8 706 aaKnown RBP13.17□□□□□ -0.3
DDB2-202ENST00000378600 BRPF3Q9ULD4 1205 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 FRMPD3Q5JV73 1810 aa13.17□□□□□ -0.3
DDB2-202ENST00000378600 SYNGAP1Q96PV0 1343 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 GOLGA8AA7E2F4 631 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 B4DLN1 442 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 CYTH3O43739 400 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 MSCO60682 206 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 CCL5P13501 91 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 CPA1P15085 419 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDB2-202ENST00000378600 MRPL12P52815 198 aaKnown RBP13.16□□□□□ -0.3
DDB2-202ENST00000378600 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 CCL14Q16627 93 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 USH1GQ495M9 461 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 TMTC3Q6ZXV5 915 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 DNERQ8NFT8 737 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 PIGSQ96S52 555 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 TINF2Q9BSI4 451 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 CENPFP49454 3210 aa13.16□□□□□ -0.3
DDB2-202ENST00000378600 BAZ2BQ9UIF8 2168 aaKnown RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 PTPDC1A2A3K4 754 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 ASB14A6NK59 587 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 PGK2P07205 417 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 GJB1P08034 283 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 PRKAR2AP13861 404 aaKnown RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 RXRAP19793 462 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 GHRHRQ02643 423 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 TOB2Q14106 344 aaPredicted RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 IFFO2Q5TF58 517 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 NSMFQ6X4W1 530 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 HOMER1Q86YM7 354 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 SRBD1Q8N5C6 995 aaKnown RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 FAM133AQ8N9E0 248 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 UPF3BQ9BZI7 483 aaKnown RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 RNF208Q9H0X6 261 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 PAK6Q9NQU5 681 aaPredicted RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 FLRT1Q9NZU1 646 aa13.15□□□□□ -0.3
DDB2-202ENST00000378600 NAP1L2Q9ULW6 460 aaPredicted RBP13.15□□□□□ -0.3
DDB2-202ENST00000378600 MCM3APO60318 1980 aa13.14□□□□□ -0.31
DDB2-202ENST00000378600 NFIBO00712 420 aa13.14□□□□□ -0.31
DDB2-202ENST00000378600 PLEKHA8P1O95397 391 aa13.14□□□□□ -0.31
DDB2-202ENST00000378600 PDIA3P30101 505 aaKnown RBP13.14□□□□□ -0.31
DDB2-202ENST00000378600 MTFR1Q15390 333 aa13.14□□□□□ -0.31
DDB2-202ENST00000378600 CCDC144CPQ8IYA2 1237 aa13.14□□□□□ -0.31
DDB2-202ENST00000378600 C22orf23Q9BZE7 217 aa13.14□□□□□ -0.31
DDB2-202ENST00000378600 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDB2-202ENST00000378600 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
DDB2-202ENST00000378600 SGPL1O95470 568 aa13.13□□□□□ -0.31
DDB2-202ENST00000378600 CYBAP13498 195 aa13.13□□□□□ -0.31
DDB2-202ENST00000378600 GJA8P48165 433 aa13.13□□□□□ -0.31
DDB2-202ENST00000378600 RPS6P62753 249 aaKnown RBP13.13□□□□□ -0.31
DDB2-202ENST00000378600 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
DDB2-202ENST00000378600 SLC35G1Q2M3R5 365 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms