RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 NAP1L3Q99457 506 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-201ENST00000378156 NOD1Q9Y239 953 aa16.57■□□□□ 0.24
NPHP4-201ENST00000378156 SMIM23A6NLE4 172 aa16.57■□□□□ 0.24
NPHP4-201ENST00000378156 CYP19A1P11511 503 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-201ENST00000378156 ARHGAP25P42331 645 aa16.57■□□□□ 0.24
NPHP4-201ENST00000378156 PPP1R7Q15435 360 aa16.57■□□□□ 0.24
NPHP4-201ENST00000378156 NUCKS1Q9H1E3 243 aaKnown RBP16.57■□□□□ 0.24
NPHP4-201ENST00000378156 ALDH3A1P30838 453 aa16.57■□□□□ 0.24
NPHP4-201ENST00000378156 EAPPQ56P03 285 aaPredicted RBP16.57■□□□□ 0.24
NPHP4-201ENST00000378156 RDH13Q8NBN7 331 aa16.57■□□□□ 0.24
NPHP4-201ENST00000378156 CCDC26Q8TAB7 109 aa16.57■□□□□ 0.24
NPHP4-201ENST00000378156 IQCDQ96DY2 449 aa16.57■□□□□ 0.24
NPHP4-201ENST00000378156 PAGR1Q9BTK6 254 aa16.57■□□□□ 0.24
NPHP4-201ENST00000378156 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
NPHP4-201ENST00000378156 BCRP11274 1271 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 COPB1P53618 953 aaKnown RBP16.56■□□□□ 0.24
NPHP4-201ENST00000378156 PLA2G4DQ86XP0 818 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 CCDC97Q96F63 343 aaPredicted RBP16.56■□□□□ 0.24
NPHP4-201ENST00000378156 DIP2CQ9Y2E4 1556 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 MMP10P09238 476 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 CA8P35219 290 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 SPICE1Q8N0Z3 855 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 TRIM7Q9C029 511 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 SPTLC3Q9NUV7 552 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 SLFN14P0C7P3 912 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 SFMBT2Q5VUG0 894 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
NPHP4-201ENST00000378156 RABEP2Q9H5N1 569 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 PCDHA4Q9UN74 947 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 NPR1P16066 1061 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
NPHP4-201ENST00000378156 CYB5R4Q7L1T6 521 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 SULF1Q8IWU6 871 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 EPSTI1Q96J88 318 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 SLC39A2Q9NP94 309 aa16.56■□□□□ 0.24
NPHP4-201ENST00000378156 XRCC5P13010 732 aaKnown RBP16.55■□□□□ 0.24
NPHP4-201ENST00000378156 CCDC144BQ3MJ40 725 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 CCDC110Q8TBZ0 833 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 ISCA1Q9BUE6 129 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 LARSQ9P2J5 1176 aaKnown RBP16.55■□□□□ 0.24
NPHP4-201ENST00000378156 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 ATP5DP30049 168 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 RBL2Q08999 1139 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 LIN9Q5TKA1 542 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 SARM1Q6SZW1 724 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 CROCCP2Q86T23 111 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 CCDC25Q86WR0 208 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 FMR1NBQ8N0W7 255 aaPredicted RBP16.55■□□□□ 0.24
NPHP4-201ENST00000378156 PLEKHA4Q9H4M7 779 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 CCPG1Q9ULG6 757 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 ZC3H13Q5T200 1668 aaKnown RBP16.55■□□□□ 0.24
NPHP4-201ENST00000378156 SLC8A3P57103 927 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 FOXO4P98177 505 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 BRD3Q15059 726 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 TSGA10IPQ3SY00 556 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 SND1Q7KZF4 910 aaKnown RBP eCLIP16.55■□□□□ 0.24
NPHP4-201ENST00000378156 DYNLL2Q96FJ2 89 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 TRIM6Q9C030 488 aaPredicted RBP16.55■□□□□ 0.24
NPHP4-201ENST00000378156 EPN1Q9Y6I3 576 aaPredicted RBP16.55■□□□□ 0.24
NPHP4-201ENST00000378156 TAF6LQ9Y6J9 622 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 CDHR2Q9BYE9 1310 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 PIK3C2BO00750 1634 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 SEPT6Q14141 434 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 WHAMMP3Q1A5X7 153 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 KRT26Q7Z3Y9 468 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 VSTM4Q8IW00 320 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 COA1Q9GZY4 146 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 CTTNBP2NLQ9P2B4 639 aa16.55■□□□□ 0.24
NPHP4-201ENST00000378156 ARMCX3Q9UH62 379 aaPredicted RBP16.55■□□□□ 0.24
NPHP4-201ENST00000378156 LAD1O00515 517 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 SCARF1Q14162 830 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 FAM26FQ5R3K3 315 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 LMNTD2Q8IXW0 634 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 MB21D2Q8IYB1 491 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-201ENST00000378156 ANKRD35Q8N283 1001 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 ENOX1Q8TC92 643 aaKnown RBP16.54■□□□□ 0.24
NPHP4-201ENST00000378156 UBLCP1Q8WVY7 318 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-201ENST00000378156 KIDINS220Q9ULH0 1771 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 MINPP1Q9UNW1 487 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 SRPRBQ9Y5M8 271 aaKnown RBP16.54■□□□□ 0.24
NPHP4-201ENST00000378156 COL4A3BPQ9Y5P4 624 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 MLXIPQ9HAP2 919 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 PANK4Q9NVE7 773 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 NEDD4P46934 1319 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 GOLGA6CA6NDK9 693 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 GOLGA6DP0CG33 693 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 ATP11AP98196 1134 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 TRIM28Q13263 835 aaKnown RBP16.54■□□□□ 0.24
NPHP4-201ENST00000378156 GPR162Q16538 588 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 KLHL7Q8IXQ5 586 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 FAM178BQ8IXR5 827 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 ALDH8A1Q9H2A2 487 aaPredicted RBP16.54■□□□□ 0.24
NPHP4-201ENST00000378156 GOLGA6AQ9NYA3 693 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 NKIRAS1Q9NYS0 192 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 PI4KBQ9UBF8 816 aa16.54■□□□□ 0.24
NPHP4-201ENST00000378156 GOLGA6BA6NDN3 693 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 RAD17O75943 681 aa16.53■□□□□ 0.24
NPHP4-201ENST00000378156 KCTD1Q719H9 257 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms