RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 LRRC41Q15345 812 aa19.65■□□□□ 0.74
HMGN4-201ENST00000377575 RNF180Q86T96 592 aa19.65■□□□□ 0.74
HMGN4-201ENST00000377575 SKAP1Q86WV1 359 aa19.65■□□□□ 0.74
HMGN4-201ENST00000377575 LSG1Q9H089 658 aaKnown RBP19.65■□□□□ 0.74
HMGN4-201ENST00000377575 PTPDC1A2A3K4 754 aa19.64■□□□□ 0.73
HMGN4-201ENST00000377575 IFIT3O14879 490 aaKnown RBP19.64■□□□□ 0.73
HMGN4-201ENST00000377575 CDC37Q16543 378 aaPredicted RBP19.64■□□□□ 0.73
HMGN4-201ENST00000377575 LRRC26Q2I0M4 334 aa19.64■□□□□ 0.73
HMGN4-201ENST00000377575 HABP4Q5JVS0 413 aaKnown RBP19.64■□□□□ 0.73
HMGN4-201ENST00000377575 CHRDL2Q6WN34 429 aa19.64■□□□□ 0.73
HMGN4-201ENST00000377575 UBA5Q9GZZ9 404 aa19.64■□□□□ 0.73
HMGN4-201ENST00000377575 ANO2Q9NQ90 1003 aa19.64■□□□□ 0.73
HMGN4-201ENST00000377575 ADD3Q9UEY8 706 aaKnown RBP19.64■□□□□ 0.73
HMGN4-201ENST00000377575 COLQQ9Y215 455 aaPredicted RBP19.64■□□□□ 0.73
HMGN4-201ENST00000377575 SYNRGQ9UMZ2 1314 aa19.63■□□□□ 0.73
HMGN4-201ENST00000377575 SOWAHBA6NEL2 793 aa19.63■□□□□ 0.73
HMGN4-201ENST00000377575 NFIBO00712 420 aa19.63■□□□□ 0.73
HMGN4-201ENST00000377575 DHX16O60231 1041 aaKnown RBP19.63■□□□□ 0.73
HMGN4-201ENST00000377575 WTAPQ15007 396 aa19.63■□□□□ 0.73
HMGN4-201ENST00000377575 STOX1Q6ZVD7 989 aa19.63■□□□□ 0.73
HMGN4-201ENST00000377575 ADGRF4Q8IZF3 695 aa19.63■□□□□ 0.73
HMGN4-201ENST00000377575 LENG1Q96BZ8 264 aaPredicted RBP19.63■□□□□ 0.73
HMGN4-201ENST00000377575 CPVLQ9H3G5 476 aa19.63■□□□□ 0.73
HMGN4-201ENST00000377575 TAF6LQ9Y6J9 622 aa19.63■□□□□ 0.73
HMGN4-201ENST00000377575 ABCB11O95342 1321 aa19.62■□□□□ 0.73
HMGN4-201ENST00000377575 LOC102724159A0A0B4J2E5 919 aa19.62■□□□□ 0.73
HMGN4-201ENST00000377575 DUSP11O75319 330 aaKnown RBP19.62■□□□□ 0.73
HMGN4-201ENST00000377575 CDC45O75419 566 aa19.62■□□□□ 0.73
HMGN4-201ENST00000377575 PGK1P00558 417 aa19.62■□□□□ 0.73
HMGN4-201ENST00000377575 BAATQ14032 418 aaPredicted RBP19.62■□□□□ 0.73
HMGN4-201ENST00000377575 PWP2Q15269 919 aaKnown RBP19.62■□□□□ 0.73
HMGN4-201ENST00000377575 CCDC144BQ3MJ40 725 aa19.62■□□□□ 0.73
HMGN4-201ENST00000377575 USH1GQ495M9 461 aa19.62■□□□□ 0.73
HMGN4-201ENST00000377575 RNF207Q6ZRF8 634 aa19.62■□□□□ 0.73
HMGN4-201ENST00000377575 MB21D2Q8IYB1 491 aaPredicted RBP19.62■□□□□ 0.73
HMGN4-201ENST00000377575 CLEC4DQ8WXI8 215 aa19.62■□□□□ 0.73
HMGN4-201ENST00000377575 ASTN1O14525 1302 aa19.61■□□□□ 0.73
HMGN4-201ENST00000377575 ATN1P54259 1190 aaPredicted RBP19.61■□□□□ 0.73
HMGN4-201ENST00000377575 TMEM67Q5HYA8 995 aa19.61■□□□□ 0.73
HMGN4-201ENST00000377575 MPHOSPH6Q99547 160 aaKnown RBP19.61■□□□□ 0.73
HMGN4-201ENST00000377575 MAF1Q9H063 256 aa19.61■□□□□ 0.73
HMGN4-201ENST00000377575 KATNBL1Q9H079 304 aa19.61■□□□□ 0.73
HMGN4-201ENST00000377575 SPC25Q9HBM1 224 aa19.61■□□□□ 0.73
HMGN4-201ENST00000377575 ZMYND8Q9ULU4 1186 aaPredicted RBP19.61■□□□□ 0.73
HMGN4-201ENST00000377575 PHF24Q9UPV7 400 aa19.61■□□□□ 0.73
HMGN4-201ENST00000377575 ADAMTS4O75173 837 aa19.6■□□□□ 0.73
HMGN4-201ENST00000377575 CALML3P27482 149 aa19.6■□□□□ 0.73
HMGN4-201ENST00000377575 ADCYAP1R1P41586 468 aa19.6■□□□□ 0.73
HMGN4-201ENST00000377575 ALDH5A1P51649 535 aaPredicted RBP19.6■□□□□ 0.73
HMGN4-201ENST00000377575 SLC30A10Q6XR72 485 aa19.6■□□□□ 0.73
HMGN4-201ENST00000377575 CHST3Q7LGC8 479 aa19.6■□□□□ 0.73
HMGN4-201ENST00000377575 TSEN34Q9BSV6 310 aaKnown RBP19.6■□□□□ 0.73
HMGN4-201ENST00000377575 MTA3Q9BTC8 594 aa19.6■□□□□ 0.73
HMGN4-201ENST00000377575 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
HMGN4-201ENST00000377575 KLRF2D3W0D1 207 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 SLC27A2O14975 620 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 SYN1P17600 705 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 ANTXR2P58335 489 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 RTP1P59025 263 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 RPS6P62753 249 aaKnown RBP19.59■□□□□ 0.73
HMGN4-201ENST00000377575 GRM4Q14833 912 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 QRICH1Q2TAL8 776 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 RNF20Q5VTR2 975 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 CREB3L3Q68CJ9 461 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 SLC39A5Q6ZMH5 540 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 CATIPQ7Z7H3 387 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 FBXO11Q86XK2 927 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 STAG2Q8N3U4 1231 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 MORC4Q8TE76 937 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 JMJD4Q9H9V9 463 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 VTA1Q9NP79 307 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 TRIOBPQ9H2D6 2365 aa19.59■□□□□ 0.73
HMGN4-201ENST00000377575 RANBP2P49792 3224 aaKnown RBP19.59■□□□□ 0.73
HMGN4-201ENST00000377575 LTBP2Q14767 1821 aa19.58■□□□□ 0.73
HMGN4-201ENST00000377575 A0A1W2PQ45 241 aaPredicted RBP19.58■□□□□ 0.72
HMGN4-201ENST00000377575 A0A1W2PQY0 241 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 PALM3A6NDB9 673 aaPredicted RBP19.58■□□□□ 0.72
HMGN4-201ENST00000377575 MOXD2PA6NHM9 499 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 C6orf222P0C671 652 aaPredicted RBP19.58■□□□□ 0.72
HMGN4-201ENST00000377575 CST5P28325 142 aaPredicted RBP19.58■□□□□ 0.72
HMGN4-201ENST00000377575 MCM5P33992 734 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 SNX17Q15036 470 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 NECTIN1Q15223 517 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 MCF2L2Q86YR7 1114 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 FBXO16Q8IX29 292 aaPredicted RBP19.58■□□□□ 0.72
HMGN4-201ENST00000377575 RGS22Q8NE09 1264 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 DNERQ8NFT8 737 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 FERMT2Q96AC1 680 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 PURBQ96QR8 312 aaKnown RBP19.58■□□□□ 0.72
HMGN4-201ENST00000377575 UPF3AQ9H1J1 476 aaKnown RBP19.58■□□□□ 0.72
HMGN4-201ENST00000377575 VAT1LQ9HCJ6 419 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 RBM27Q9P2N5 1060 aaKnown RBP19.58■□□□□ 0.72
HMGN4-201ENST00000377575 ATP11BQ9Y2G3 1177 aa19.58■□□□□ 0.72
HMGN4-201ENST00000377575 MRPL11Q9Y3B7 192 aaKnown RBP19.58■□□□□ 0.72
HMGN4-201ENST00000377575 B4DLN1 442 aa19.57■□□□□ 0.72
HMGN4-201ENST00000377575 ADCY6O43306 1168 aa19.57■□□□□ 0.72
HMGN4-201ENST00000377575 PRC1O43663 620 aa19.57■□□□□ 0.72
HMGN4-201ENST00000377575 MRPL12P52815 198 aaKnown RBP19.57■□□□□ 0.72
HMGN4-201ENST00000377575 GJA9P57773 515 aa19.57■□□□□ 0.72
HMGN4-201ENST00000377575 TNFAIP2Q03169 654 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms