RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 DIS3LQ8TF46 1054 aaKnown RBP25.75■■□□□ 1.71
SRM-201ENST00000376957 VAT1LQ9HCJ6 419 aa25.75■■□□□ 1.71
SRM-201ENST00000376957 ABCB11O95342 1321 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 LOC102724159A0A0B4J2E5 919 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 CCDC69A6NI79 296 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 PRC1O43663 620 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 REC8O95072 547 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 MYCNP04198 464 aaPredicted RBP25.74■■□□□ 1.71
SRM-201ENST00000376957 CNTN2Q02246 1040 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 PWP2Q15269 919 aaKnown RBP25.74■■□□□ 1.71
SRM-201ENST00000376957 RNF207Q6ZRF8 634 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 ARMCX2Q7L311 632 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 RNF180Q86T96 592 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 SPC25Q9HBM1 224 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 XPNPEP3Q9NQH7 507 aa25.74■■□□□ 1.71
SRM-201ENST00000376957 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.74■■□□□ 1.71
SRM-201ENST00000376957 KIF5BP33176 963 aa25.73■■□□□ 1.71
SRM-201ENST00000376957 ACVR2BQ13705 512 aa25.73■■□□□ 1.71
SRM-201ENST00000376957 USH1GQ495M9 461 aa25.73■■□□□ 1.71
SRM-201ENST00000376957 MCF2L2Q86YR7 1114 aa25.73■■□□□ 1.71
SRM-201ENST00000376957 CCDC144CPQ8IYA2 1237 aa25.73■■□□□ 1.71
SRM-201ENST00000376957 CTCFLQ8NI51 663 aaPredicted RBP25.73■■□□□ 1.71
SRM-201ENST00000376957 IGDCC4Q8TDY8 1250 aa25.73■■□□□ 1.71
SRM-201ENST00000376957 SNAI1O95863 264 aaPredicted RBP25.72■■□□□ 1.71
SRM-201ENST00000376957 ZNF865P0CJ78 1059 aaPredicted RBP25.72■■□□□ 1.71
SRM-201ENST00000376957 CALM1P0DP23 149 aa25.72■■□□□ 1.71
SRM-201ENST00000376957 CALM2P0DP24 149 aa25.72■■□□□ 1.71
SRM-201ENST00000376957 CALM3P0DP25 149 aa25.72■■□□□ 1.71
SRM-201ENST00000376957 BAATQ14032 418 aaPredicted RBP25.72■■□□□ 1.71
SRM-201ENST00000376957 FBXO11Q86XK2 927 aa25.72■■□□□ 1.71
SRM-201ENST00000376957 RGS22Q8NE09 1264 aa25.72■■□□□ 1.71
SRM-201ENST00000376957 MAP3K14Q99558 947 aa25.72■■□□□ 1.71
SRM-201ENST00000376957 AMNQ9BXJ7 453 aa25.72■■□□□ 1.71
SRM-201ENST00000376957 MRPL11Q9Y3B7 192 aaKnown RBP25.72■■□□□ 1.71
SRM-201ENST00000376957 TAF6LQ9Y6J9 622 aa25.72■■□□□ 1.71
SRM-201ENST00000376957 PALM3A6NDB9 673 aaPredicted RBP25.71■■□□□ 1.71
SRM-201ENST00000376957 HMGB1P09429 215 aaKnown RBP25.71■■□□□ 1.71
SRM-201ENST00000376957 GRM4Q14833 912 aa25.71■■□□□ 1.71
SRM-201ENST00000376957 ANO1Q5XXA6 986 aa25.71■■□□□ 1.71
SRM-201ENST00000376957 SYNE3Q6ZMZ3 975 aa25.71■■□□□ 1.71
SRM-201ENST00000376957 SENP6Q9GZR1 1112 aaPredicted RBP25.71■■□□□ 1.71
SRM-201ENST00000376957 CPVLQ9H3G5 476 aa25.71■■□□□ 1.71
SRM-201ENST00000376957 MAD2L2Q9UI95 211 aa25.71■■□□□ 1.71
SRM-201ENST00000376957 FRMPD3Q5JV73 1810 aa25.71■■□□□ 1.71
SRM-201ENST00000376957 NFIBO00712 420 aa25.7■■□□□ 1.7
SRM-201ENST00000376957 DDAH1O94760 285 aa25.7■■□□□ 1.7
SRM-201ENST00000376957 CALML3P27482 149 aa25.7■■□□□ 1.7
SRM-201ENST00000376957 QRICH1Q2TAL8 776 aa25.7■■□□□ 1.7
SRM-201ENST00000376957 GJC2Q5T442 439 aaPredicted RBP25.7■■□□□ 1.7
SRM-201ENST00000376957 NUP133Q8WUM0 1156 aa25.7■■□□□ 1.7
SRM-201ENST00000376957 NEK1Q96PY6 1258 aa25.7■■□□□ 1.7
SRM-201ENST00000376957 JMJD4Q9H9V9 463 aa25.7■■□□□ 1.7
SRM-201ENST00000376957 COL6A1P12109 1028 aa25.69■■□□□ 1.7
SRM-201ENST00000376957 TAL1P17542 331 aaPredicted RBP25.69■■□□□ 1.7
SRM-201ENST00000376957 LIFRP42702 1097 aa25.69■■□□□ 1.7
SRM-201ENST00000376957 GNAQP50148 359 aa25.69■■□□□ 1.7
SRM-201ENST00000376957 MNX1P50219 401 aaPredicted RBP25.69■■□□□ 1.7
SRM-201ENST00000376957 ANTXR2P58335 489 aa25.69■■□□□ 1.7
SRM-201ENST00000376957 TROAPQ12815 778 aa25.69■■□□□ 1.7
SRM-201ENST00000376957 STAG2Q8N3U4 1231 aa25.69■■□□□ 1.7
SRM-201ENST00000376957 DNERQ8NFT8 737 aa25.69■■□□□ 1.7
SRM-201ENST00000376957 LZTS2Q9BRK4 669 aa25.69■■□□□ 1.7
SRM-201ENST00000376957 LY9Q9HBG7 655 aa25.69■■□□□ 1.7
SRM-201ENST00000376957 SOWAHBA6NEL2 793 aa25.68■■□□□ 1.7
SRM-201ENST00000376957 ZBTB5O15062 677 aa25.68■■□□□ 1.7
SRM-201ENST00000376957 DUSP11O75319 330 aaKnown RBP25.68■■□□□ 1.7
SRM-201ENST00000376957 LRRC41Q15345 812 aa25.68■■□□□ 1.7
SRM-201ENST00000376957 TSGA10IPQ3SY00 556 aa25.68■■□□□ 1.7
SRM-201ENST00000376957 NOL8Q76FK4 1167 aaKnown RBP25.68■■□□□ 1.7
SRM-201ENST00000376957 ZNF654Q8IZM8 581 aa25.68■■□□□ 1.7
SRM-201ENST00000376957 CLEC4DQ8WXI8 215 aa25.68■■□□□ 1.7
SRM-201ENST00000376957 SLC12A7Q9Y666 1083 aa25.68■■□□□ 1.7
SRM-201ENST00000376957 MYH6P13533 1939 aa25.67■■□□□ 1.7
SRM-201ENST00000376957 MKI67P46013 3256 aaKnown RBP25.67■■□□□ 1.7
SRM-201ENST00000376957 H0YGN5 161 aa25.67■■□□□ 1.7
SRM-201ENST00000376957 RPS6P62753 249 aaKnown RBP25.67■■□□□ 1.7
SRM-201ENST00000376957 CCDC144BQ3MJ40 725 aa25.67■■□□□ 1.7
SRM-201ENST00000376957 FGD4Q96M96 766 aa25.67■■□□□ 1.7
SRM-201ENST00000376957 ALDH5A1P51649 535 aaPredicted RBP25.66■■□□□ 1.7
SRM-201ENST00000376957 FGD1P98174 961 aa25.66■■□□□ 1.7
SRM-201ENST00000376957 SAMD3Q8N6K7 520 aa25.66■■□□□ 1.7
SRM-201ENST00000376957 VTA1Q9NP79 307 aa25.66■■□□□ 1.7
SRM-201ENST00000376957 MAP3K20Q9NYL2 800 aaKnown RBP25.66■■□□□ 1.7
SRM-201ENST00000376957 SMCHD1A6NHR9 2005 aa25.65■■□□□ 1.7
SRM-201ENST00000376957 SH2B2O14492 632 aaPredicted RBP25.65■■□□□ 1.7
SRM-201ENST00000376957 EPB41L2O43491 1005 aaKnown RBP25.65■■□□□ 1.7
SRM-201ENST00000376957 PGK1P00558 417 aa25.65■■□□□ 1.7
SRM-201ENST00000376957 SMARCA1P28370 1054 aa25.65■■□□□ 1.7
SRM-201ENST00000376957 PDE4DQ08499 809 aa25.65■■□□□ 1.7
SRM-201ENST00000376957 IQSEC1Q6DN90 963 aa25.65■■□□□ 1.7
SRM-201ENST00000376957 DHX32Q7L7V1 743 aaKnown RBP25.65■■□□□ 1.7
SRM-201ENST00000376957 HOMER1Q86YM7 354 aa25.65■■□□□ 1.7
SRM-201ENST00000376957 PCSK9Q8NBP7 692 aaKnown RBP25.65■■□□□ 1.7
SRM-201ENST00000376957 TSEN34Q9BSV6 310 aaKnown RBP25.65■■□□□ 1.7
SRM-201ENST00000376957 RIOX1Q9H6W3 641 aa25.65■■□□□ 1.7
SRM-201ENST00000376957 SEC63Q9UGP8 760 aaKnown RBP25.65■■□□□ 1.7
SRM-201ENST00000376957 PCDHA1Q9Y5I3 950 aa25.65■■□□□ 1.7
SRM-201ENST00000376957 TNFAIP2Q03169 654 aa25.64■■□□□ 1.7
SRM-201ENST00000376957 SLC30A10Q6XR72 485 aa25.64■■□□□ 1.7
SRM-201ENST00000376957 C7orf61Q8IZ16 206 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms