RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 STAT3P40763 770 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 PRCPP42785 496 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 NFIAQ12857 509 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 NTRK3Q16288 839 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 ADAT2Q7Z6V5 191 aaKnown RBP12.42□□□□□ -0.42
HDAC6-203ENST00000376619 TBC1D22AQ8WUA7 517 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 DDX25Q9UHL0 483 aaKnown RBP12.42□□□□□ -0.42
HDAC6-203ENST00000376619 CLIC2O15247 247 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 FAM13AO94988 1023 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 GCNT3O95395 438 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 ALAS1P13196 640 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 GPR162Q16538 588 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 KCTD19Q17RG1 926 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-203ENST00000376619 GPBP1Q86WP2 473 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 RIOK1Q9BRS2 568 aaKnown RBP12.42□□□□□ -0.42
HDAC6-203ENST00000376619 CCDC94Q9BW85 323 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-203ENST00000376619 PCDHAC2Q9Y5I4 1007 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 WNT7AO00755 349 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 CYLC1P35663 651 aaPredicted RBP12.42□□□□□ -0.42
HDAC6-203ENST00000376619 SF3B3Q15393 1217 aaKnown RBP12.42□□□□□ -0.42
HDAC6-203ENST00000376619 C12orf60Q5U649 245 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 TAX1BP1Q86VP1 789 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 PIGOQ8TEQ8 1089 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 CCDC113Q9H0I3 377 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
HDAC6-203ENST00000376619 COPB1P53618 953 aaKnown RBP12.41□□□□□ -0.42
HDAC6-203ENST00000376619 GYS2P54840 703 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 KMT5BQ4FZB7 885 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 AMIGO3Q86WK7 504 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 TBC1D16Q8TBP0 767 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 BBOX1O75936 387 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 PAFAH1B1P43034 410 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 ARHGAP44Q17R89 818 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 TUBGCP2Q9BSJ2 902 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 POLLQ9UGP5 575 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 CYP2J2P51589 502 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 KRT31Q15323 416 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 ALX1Q15699 326 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 KSR1Q8IVT5 923 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 KRT222Q8N1A0 295 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 SLC35F6Q8N357 371 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 BICD1Q96G01 975 aa12.41□□□□□ -0.42
HDAC6-203ENST00000376619 TFRCP02786 760 aaKnown RBP12.4□□□□□ -0.42
HDAC6-203ENST00000376619 ALDH1B1P30837 517 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 ABCB5Q2M3G0 1257 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 DPH6Q7L8W6 267 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 MYCT1Q8N699 235 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 CTNNBL1Q8WYA6 563 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-203ENST00000376619 ALDH8A1Q9H2A2 487 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-203ENST00000376619 SPON1Q9HCB6 807 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 ZNF277Q9NRM2 450 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-203ENST00000376619 IMPACTQ9P2X3 320 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 HDAC9Q9UKV0 1011 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 PPP1R12BO60237 982 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-203ENST00000376619 SRGAP2O75044 1071 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 PFKFB3Q16875 520 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-203ENST00000376619 FBXO33Q7Z6M2 555 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 ERO1AQ96HE7 468 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 ZNF408Q9H9D4 720 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 MRPL44Q9H9J2 332 aaKnown RBP12.4□□□□□ -0.42
HDAC6-203ENST00000376619 GINS2Q9Y248 185 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 E9PMD0 336 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-203ENST00000376619 BMS1Q14692 1282 aaKnown RBP12.4□□□□□ -0.42
HDAC6-203ENST00000376619 SLC15A2Q16348 729 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 TCHPQ9BT92 498 aa12.4□□□□□ -0.42
HDAC6-203ENST00000376619 SMIM23A6NLE4 172 aa12.4□□□□□ -0.43
HDAC6-203ENST00000376619 BACH1O14867 736 aa12.4□□□□□ -0.43
HDAC6-203ENST00000376619 KRT86O43790 486 aa12.4□□□□□ -0.43
HDAC6-203ENST00000376619 VSTM4Q8IW00 320 aa12.4□□□□□ -0.43
HDAC6-203ENST00000376619 FAM114A1Q8IWE2 563 aa12.4□□□□□ -0.43
HDAC6-203ENST00000376619 ERMNQ8TAM6 284 aa12.4□□□□□ -0.43
HDAC6-203ENST00000376619 PKNOX2Q96KN3 472 aa12.4□□□□□ -0.43
HDAC6-203ENST00000376619 CNOT6LQ96LI5 555 aaKnown RBP12.4□□□□□ -0.43
HDAC6-203ENST00000376619 TACC3Q9Y6A5 838 aa12.4□□□□□ -0.43
HDAC6-203ENST00000376619 TTLL1O95922 423 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 ABCB4P21439 1286 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 PTPAQ15257 358 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-203ENST00000376619 VPS18Q9P253 973 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 BCL9O00512 1426 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 WDR24Q96S15 920 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDAC6-203ENST00000376619 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-203ENST00000376619 FGFR1OPO95684 399 aaKnown RBP12.39□□□□□ -0.43
HDAC6-203ENST00000376619 OR8K1Q8NGG5 319 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 GOLGA1Q92805 767 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 GSDMAQ96QA5 445 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 ZCCHC17Q9NP64 241 aaKnown RBP12.39□□□□□ -0.43
HDAC6-203ENST00000376619 LUC7LQ9NQ29 371 aaKnown RBP12.39□□□□□ -0.43
HDAC6-203ENST00000376619 ST7Q9NRC1 585 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 LRRC4BQ9NT99 713 aa12.39□□□□□ -0.43
HDAC6-203ENST00000376619 NPHP3-ACAD11A0A0J9YXS1 232 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 BICDL2A1A5D9 508 aa12.38□□□□□ -0.43
HDAC6-203ENST00000376619 MAGEA1P43355 309 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms