RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CYTH3O43739 400 aa24.4■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CYP2C19P33261 490 aa24.4■■□□□ 1.5
MAP1LC3A-202ENST00000374837 FGD1P98174 961 aa24.4■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CCDC144CPQ8IYA2 1237 aa24.4■■□□□ 1.5
MAP1LC3A-202ENST00000374837 CLEC4DQ8WXI8 215 aa24.4■■□□□ 1.5
MAP1LC3A-202ENST00000374837 TM6SF1Q9BZW5 370 aa24.4■■□□□ 1.5
MAP1LC3A-202ENST00000374837 RPTORQ8N122 1335 aa24.39■■□□□ 1.5
MAP1LC3A-202ENST00000374837 NFIBO00712 420 aa24.39■■□□□ 1.49
MAP1LC3A-202ENST00000374837 USH1GQ495M9 461 aa24.39■■□□□ 1.49
MAP1LC3A-202ENST00000374837 APOA5Q6Q788 366 aa24.39■■□□□ 1.49
MAP1LC3A-202ENST00000374837 RUFY3Q7L099 469 aa24.39■■□□□ 1.49
MAP1LC3A-202ENST00000374837 FANCBQ8NB91 859 aa24.39■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PIGSQ96S52 555 aa24.39■■□□□ 1.49
MAP1LC3A-202ENST00000374837 HMX1Q9NP08 348 aaPredicted RBP24.39■■□□□ 1.49
MAP1LC3A-202ENST00000374837 POTEB2H3BUK9 544 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 ZBTB5O15062 677 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 GJB1P08034 283 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 GNAQP50148 359 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 NSMFQ6X4W1 530 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 MICU3Q86XE3 530 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 FBXO11Q86XK2 927 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 FBXL16Q8N461 479 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 LZTS2Q9BRK4 669 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PAK6Q9NQU5 681 aaPredicted RBP24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 CYP39A1Q9NYL5 469 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 CYP46A1Q9Y6A2 500 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 ZNF236Q9UL36 1845 aa24.38■■□□□ 1.49
MAP1LC3A-202ENST00000374837 KLF18A0A0U1RQI7 1052 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PLEKHA8P1O95397 391 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 EN2P19622 333 aaPredicted RBP24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 SMARCA1P28370 1054 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 CNTN2Q02246 1040 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 APOBRQ0VD83 1088 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 HOMER1Q86YM7 354 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 SRBD1Q8N5C6 995 aaKnown RBP24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 FAM133AQ8N9E0 248 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 BRF1Q92994 677 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 FGD4Q96M96 766 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 TINF2Q9BSI4 451 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 AGXT2Q9BYV1 514 aa24.37■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PFASO15067 1338 aa24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 ZBTB43O43298 467 aa24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PPP1R11O60927 126 aaPredicted RBP24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 CCND3P30281 292 aaPredicted RBP24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 ANAPC15P60006 121 aa24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 BAATQ14032 418 aaPredicted RBP24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 CMTR1Q8N1G2 835 aaKnown RBP24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 TRPV1Q8NER1 839 aa24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 DEFB118Q96PH6 123 aa24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 SPZ1Q9BXG8 430 aa24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 AMNQ9BXJ7 453 aa24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 UPF3BQ9BZI7 483 aaKnown RBP24.36■■□□□ 1.49
MAP1LC3A-202ENST00000374837 ABCB11O95342 1321 aa24.35■■□□□ 1.49
MAP1LC3A-202ENST00000374837 SOWAHBA6NEL2 793 aa24.35■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PRAMEF19Q5SWL8 479 aa24.35■■□□□ 1.49
MAP1LC3A-202ENST00000374837 ZNF467Q7Z7K2 595 aaPredicted RBP24.35■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PIBF1Q8WXW3 757 aa24.35■■□□□ 1.49
MAP1LC3A-202ENST00000374837 MRPL11Q9Y3B7 192 aaKnown RBP24.35■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PNMA6FA0A0J9YX94 578 aa24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PTPDC1A2A3K4 754 aa24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 SGPL1O95470 568 aa24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 GJA8P48165 433 aa24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 MAMDC4Q6UXC1 1216 aa24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 TMTC3Q6ZXV5 915 aa24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 MSL3Q8N5Y2 521 aaKnown RBP24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 RGS22Q8NE09 1264 aa24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 U2AF1L4Q8WU68 220 aaKnown RBP24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PURBQ96QR8 312 aaKnown RBP24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 NAP1L2Q9ULW6 460 aaPredicted RBP24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 PCDHA1Q9Y5I3 950 aa24.34■■□□□ 1.49
MAP1LC3A-202ENST00000374837 GOLGA8AA7E2F4 631 aa24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 GOLGA8BA8MQT2 603 aa24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 CYBAP13498 195 aa24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 RCAN1P53805 252 aa24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 RTN1Q16799 776 aa24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 RNF207Q6ZRF8 634 aa24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 CCDC82Q8N4S0 544 aa24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 TBC1D5Q92609 795 aa24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 RRP36Q96EU6 259 aaKnown RBP24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 IL17RAQ96F46 866 aa24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 FAM217BQ9NTX9 383 aaPredicted RBP24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 RBM28Q9NW13 759 aaKnown RBP24.33■■□□□ 1.49
MAP1LC3A-202ENST00000374837 SNAI1O95863 264 aaPredicted RBP24.32■■□□□ 1.48
MAP1LC3A-202ENST00000374837 RPS6P62753 249 aaKnown RBP24.32■■□□□ 1.48
MAP1LC3A-202ENST00000374837 TOB2Q14106 344 aaPredicted RBP24.32■■□□□ 1.48
MAP1LC3A-202ENST00000374837 SLC30A10Q6XR72 485 aa24.32■■□□□ 1.48
MAP1LC3A-202ENST00000374837 SHISA4Q96DD7 197 aa24.32■■□□□ 1.48
MAP1LC3A-202ENST00000374837 PDRG1Q9NUG6 133 aa24.32■■□□□ 1.48
MAP1LC3A-202ENST00000374837 CALML3P27482 149 aa24.31■■□□□ 1.48
MAP1LC3A-202ENST00000374837 CNGA1P29973 690 aa24.31■■□□□ 1.48
MAP1LC3A-202ENST00000374837 CDC27P30260 824 aa24.31■■□□□ 1.48
MAP1LC3A-202ENST00000374837 EVCP57679 992 aa24.31■■□□□ 1.48
MAP1LC3A-202ENST00000374837 CRISPLD2Q9H0B8 497 aa24.31■■□□□ 1.48
MAP1LC3A-202ENST00000374837 NRBP1Q9UHY1 535 aa24.31■■□□□ 1.48
MAP1LC3A-202ENST00000374837 ASTN1O14525 1302 aa24.31■■□□□ 1.48
MAP1LC3A-202ENST00000374837 SYNGAP1Q96PV0 1343 aa24.31■■□□□ 1.48
MAP1LC3A-202ENST00000374837 TFRCP02786 760 aaKnown RBP24.3■■□□□ 1.48
MAP1LC3A-202ENST00000374837 METAP2P50579 478 aaKnown RBP eCLIP24.3■■□□□ 1.48
MAP1LC3A-202ENST00000374837 TRAF1Q13077 416 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms