RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 A0A087X0B3 334 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 KRT86O43790 486 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 TTLL1O95922 423 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 TPH2Q8IWU9 490 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 OR8K1Q8NGG5 319 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 ERMNQ8TAM6 284 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 CNOT6LQ96LI5 555 aaKnown RBP13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 POLLQ9UGP5 575 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 ACTN4O43707 911 aaKnown RBP13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 STX10O60499 249 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 ZMYND10O75800 440 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 LMAN1P49257 510 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 NCAPHQ15003 741 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 GPBP1Q86WP2 473 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 CSRNP1Q96S65 589 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 OSBPL5Q9H0X9 879 aaPredicted RBP13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 DAGLAQ9Y4D2 1042 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
PACSIN1-202ENST00000374043 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 C21orf2O43822 256 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 ATP2C1P98194 919 aaPredicted RBP13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 FBXO38Q6PIJ6 1188 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 TMTC1Q8IUR5 882 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 TAF4BQ92750 862 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 TFR2Q9UP52 801 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 SEPT2Q15019 361 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 TMEM132AQ24JP5 1023 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 UBE2Q2Q8WVN8 375 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 JAKMIP2Q96AA8 810 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 WDR24Q96S15 920 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 PCDHA6Q9UN73 950 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 PCDHB13Q9Y5F0 798 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 PCDHA8Q9Y5H6 950 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 FLT1P17948 1338 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 ZNF658Q5TYW1 1059 aaPredicted RBP13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 HPSEQ9Y251 543 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 RGPD5Q99666 1765 aa13.16□□□□□ -0.3
PACSIN1-202ENST00000374043 PDE6BP35913 854 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 PAFAH1B1P43034 410 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 H7C1D1 291 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 FAM13AO94988 1023 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 TAL1P17542 331 aaPredicted RBP13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 DNAJC21Q5F1R6 531 aaKnown RBP13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 CCDC65Q8IXS2 484 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 IL17RBQ9NRM6 502 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 EPN1Q9Y6I3 576 aaPredicted RBP13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 CACNA1FO60840 1977 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 MRC1P22897 1456 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 SFI1A8K8P3 1242 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 KRT83P78385 493 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 GRM4Q14833 912 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 AOC3Q16853 763 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 LARP4BQ92615 738 aaKnown RBP13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 PKNOX2Q96KN3 472 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 BARHL2Q9NY43 387 aa13.15□□□□□ -0.3
PACSIN1-202ENST00000374043 PPP1R12BO60237 982 aaPredicted RBP13.15□□□□□ -0.31
PACSIN1-202ENST00000374043 DLGAP5Q15398 846 aa13.15□□□□□ -0.31
PACSIN1-202ENST00000374043 ABCB5Q2M3G0 1257 aa13.15□□□□□ -0.31
PACSIN1-202ENST00000374043 RABEP2Q9H5N1 569 aa13.15□□□□□ -0.31
PACSIN1-202ENST00000374043 OGFRQ9NZT2 677 aa13.15□□□□□ -0.31
PACSIN1-202ENST00000374043 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.31
PACSIN1-202ENST00000374043 BUB1O43683 1085 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 EIF3JO75822 258 aaKnown RBP13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 GH2P01242 217 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 BMP6P22004 513 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 STAT3P40763 770 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 NFIAQ12857 509 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 HLTFQ14527 1009 aaKnown RBP eCLIP13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 GYS1P13807 737 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 TCP11X2Q5H9J9 407 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 CCDC84Q86UT8 332 aaPredicted RBP13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 ZNF710Q8N1W2 664 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 GCNT3O95395 438 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 MYCLP12524 364 aaPredicted RBP13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 CRKP46108 304 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 FXR1P51114 621 aaKnown RBP eCLIP13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 ALS2CR12Q96Q35 445 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 LRRC4BQ9NT99 713 aa13.14□□□□□ -0.31
PACSIN1-202ENST00000374043 KIF20AO95235 890 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 NSMFQ6X4W1 530 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 BPIFA3Q9BQP9 254 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 PANK4Q9NVE7 773 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 JCADQ9P266 1359 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 TACC1O75410 805 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 CXCR5P32302 372 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 SSR1P43307 286 aaKnown RBP13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 MAGEA1P43355 309 aa13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 RC3H1Q5TC82 1133 aaKnown RBP13.13□□□□□ -0.31
PACSIN1-202ENST00000374043 P2RX5Q93086 422 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms