RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 FGD1P98174 961 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 COA7Q96BR5 231 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 UPF3BQ9BZI7 483 aaKnown RBP23.56■■□□□ 1.36
SYNC-201ENST00000373484 UBA5Q9GZZ9 404 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 ZNF536O15090 1300 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 HTTP42858 3142 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 SLC25A27O95847 323 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 CALM1P0DP23 149 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 CALM2P0DP24 149 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 CALM3P0DP25 149 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 HOXD10P28358 340 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 FOXD4L5Q5VV16 416 aaPredicted RBP23.56■■□□□ 1.36
SYNC-201ENST00000373484 APOA5Q6Q788 366 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 GPR142Q7Z601 462 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 CPXCR1Q8N123 301 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 RNF214Q8ND24 703 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 FOXD4L4Q8WXT5 416 aaPredicted RBP23.56■■□□□ 1.36
SYNC-201ENST00000373484 RAVER2Q9HCJ3 691 aaKnown RBP23.56■■□□□ 1.36
SYNC-201ENST00000373484 SH2B1Q9NRF2 756 aaPredicted RBP23.56■■□□□ 1.36
SYNC-201ENST00000373484 SRRDQ9UH36 339 aa23.56■■□□□ 1.36
SYNC-201ENST00000373484 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
SYNC-201ENST00000373484 KLRF2D3W0D1 207 aa23.55■■□□□ 1.36
SYNC-201ENST00000373484 ERCC3P19447 782 aa23.55■■□□□ 1.36
SYNC-201ENST00000373484 PKN2Q16513 984 aaKnown RBP23.55■■□□□ 1.36
SYNC-201ENST00000373484 SNRNP48Q6IEG0 339 aaKnown RBP23.55■■□□□ 1.36
SYNC-201ENST00000373484 CHAMP1Q96JM3 812 aa23.55■■□□□ 1.36
SYNC-201ENST00000373484 MROH8Q9H579 483 aa23.55■■□□□ 1.36
SYNC-201ENST00000373484 STX6O43752 255 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 PRMT2P55345 433 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 SNAP25P60880 206 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 PLEKHH3Q7Z736 793 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 ADGRF4Q8IZF3 695 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 MYRIPQ8NFW9 859 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 CTCFLQ8NI51 663 aaPredicted RBP23.54■■□□□ 1.36
SYNC-201ENST00000373484 BRF1Q92994 677 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 GADD45BO75293 160 aaPredicted RBP23.54■■□□□ 1.36
SYNC-201ENST00000373484 GTF2F1P35269 517 aaKnown RBP eCLIP23.54■■□□□ 1.36
SYNC-201ENST00000373484 COPB2P35606 906 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 WDR78Q5VTH9 848 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 SYNE3Q6ZMZ3 975 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 NCAPG2Q86XI2 1143 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 SPTLC3Q9NUV7 552 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 GABRQQ9UN88 632 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 PTPN22Q9Y2R2 807 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 RIPK3Q9Y572 518 aa23.54■■□□□ 1.36
SYNC-201ENST00000373484 PLXNA1Q9UIW2 1896 aa23.53■■□□□ 1.36
SYNC-201ENST00000373484 KLF18A0A0U1RQI7 1052 aa23.53■■□□□ 1.36
SYNC-201ENST00000373484 RXRAP19793 462 aa23.53■■□□□ 1.36
SYNC-201ENST00000373484 KIF5BP33176 963 aa23.53■■□□□ 1.36
SYNC-201ENST00000373484 PRKCZQ05513 592 aa23.53■■□□□ 1.36
SYNC-201ENST00000373484 CCDC174Q6PII3 467 aa23.53■■□□□ 1.36
SYNC-201ENST00000373484 MICU3Q86XE3 530 aa23.53■■□□□ 1.36
SYNC-201ENST00000373484 PKNOX2Q96KN3 472 aa23.53■■□□□ 1.36
SYNC-201ENST00000373484 GJD2Q9UKL4 321 aa23.53■■□□□ 1.36
SYNC-201ENST00000373484 F13A1P00488 732 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 APOBRQ0VD83 1088 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 FBXO46Q6PJ61 603 aaPredicted RBP23.52■■□□□ 1.36
SYNC-201ENST00000373484 RAB11FIP4Q86YS3 637 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 AGBL1Q96MI9 1066 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 MCOLN1Q9GZU1 580 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 JMJD4Q9H9V9 463 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 ZBTB43O43298 467 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 ICAM1P05362 532 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 PTPREP23469 700 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 RCAN1P53805 252 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 TOB2Q14106 344 aaPredicted RBP23.52■■□□□ 1.36
SYNC-201ENST00000373484 FANCBQ8NB91 859 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 RIOX1Q9H6W3 641 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 PDRG1Q9NUG6 133 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 SMC3Q9UQE7 1217 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 IVNS1ABPQ9Y6Y0 642 aa23.52■■□□□ 1.36
SYNC-201ENST00000373484 TCHHQ07283 1943 aa23.51■■□□□ 1.35
SYNC-201ENST00000373484 SYT1P21579 422 aa23.51■■□□□ 1.35
SYNC-201ENST00000373484 FLT3LGP49771 235 aa23.51■■□□□ 1.35
SYNC-201ENST00000373484 SLC35G1Q2M3R5 365 aa23.51■■□□□ 1.35
SYNC-201ENST00000373484 MORN1Q5T089 497 aa23.51■■□□□ 1.35
SYNC-201ENST00000373484 NBPF11Q86T75 865 aa23.51■■□□□ 1.35
SYNC-201ENST00000373484 CCDC144CPQ8IYA2 1237 aa23.51■■□□□ 1.35
SYNC-201ENST00000373484 SOCS4Q8WXH5 440 aa23.51■■□□□ 1.35
SYNC-201ENST00000373484 STRNO43815 780 aa23.5■■□□□ 1.35
SYNC-201ENST00000373484 DHX16O60231 1041 aaKnown RBP23.5■■□□□ 1.35
SYNC-201ENST00000373484 GNAQP50148 359 aa23.5■■□□□ 1.35
SYNC-201ENST00000373484 EVCP57679 992 aa23.5■■□□□ 1.35
SYNC-201ENST00000373484 GRB14Q14449 540 aa23.5■■□□□ 1.35
SYNC-201ENST00000373484 CDC37Q16543 378 aaPredicted RBP23.5■■□□□ 1.35
SYNC-201ENST00000373484 MTMR8Q96EF0 704 aa23.5■■□□□ 1.35
SYNC-201ENST00000373484 NUDT12Q9BQG2 462 aa23.5■■□□□ 1.35
SYNC-201ENST00000373484 FAM13BQ9NYF5 915 aa23.5■■□□□ 1.35
SYNC-201ENST00000373484 CCPG1Q9ULG6 757 aa23.5■■□□□ 1.35
SYNC-201ENST00000373484 PTCH2Q9Y6C5 1203 aa23.5■■□□□ 1.35
SYNC-201ENST00000373484 RBBP6Q7Z6E9 1792 aaKnown RBP23.5■■□□□ 1.35
SYNC-201ENST00000373484 SLC15A5A6NIM6 579 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 CYTH3O43739 400 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 AK2P54819 239 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 TKFCQ3LXA3 575 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 USP6NLQ92738 828 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 FUCA2Q9BTY2 467 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 ALDH8A1Q9H2A2 487 aaPredicted RBP23.49■■□□□ 1.35
SYNC-201ENST00000373484 VAT1LQ9HCJ6 419 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 PNMA2Q9UL42 364 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms