RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 NAALADL2Q58DX5 795 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 ZNF658Q5TYW1 1059 aaPredicted RBP15.12■□□□□ 0.01
CSTF2-201ENST00000372972 TTBK2Q6IQ55 1244 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 TRIM34Q9BYJ4 488 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 CUEDC2Q9H467 287 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 KANSL2Q9H9L4 492 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 TMEM260Q9NX78 707 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 NYAP2Q9P242 653 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 CD2APQ9Y5K6 639 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 MYH8P13535 1937 aa15.12■□□□□ 0.01
CSTF2-201ENST00000372972 USP27XA6NNY8 438 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 SLURP2P0DP57 97 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 GTF2F1P35269 517 aaKnown RBP eCLIP15.11■□□□□ 0.01
CSTF2-201ENST00000372972 PTGER2P43116 358 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 NR1I3Q14994 352 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 TATDN1Q6P1N9 297 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 CCDC112Q8NEF3 446 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 RIC8AQ9NPQ8 531 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 ZBTB12Q9Y330 459 aaPredicted RBP15.11■□□□□ 0.01
CSTF2-201ENST00000372972 FER1L6Q2WGJ9 1857 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 ZBTB5O15062 677 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 TBX2Q13207 712 aaPredicted RBP15.11■□□□□ 0.01
CSTF2-201ENST00000372972 SEMA3FQ13275 785 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 PTPN14Q15678 1187 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 CDKAL1Q5VV42 579 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 SPECC1LQ69YQ0 1117 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 KCTD1Q719H9 257 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 CABP7Q86V35 215 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 MTMR8Q96EF0 704 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 TAOK3Q9H2K8 898 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 TMX1Q9H3N1 280 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 MAGEF1Q9HAY2 307 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 KBTBD4Q9NVX7 518 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 TRMT1Q9NXH9 659 aaKnown RBP15.11■□□□□ 0.01
CSTF2-201ENST00000372972 RWDD2AQ9UIY3 292 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 PAXBP1Q9Y5B6 917 aa15.11■□□□□ 0.01
CSTF2-201ENST00000372972 SIPA1L1O43166 1804 aa15.1■□□□□ 0.01
CSTF2-201ENST00000372972 A0A1B0GTH6 734 aa15.1■□□□□ 0.01
CSTF2-201ENST00000372972 EEF2P13639 858 aaKnown RBP15.1■□□□□ 0.01
CSTF2-201ENST00000372972 SLC16A2P36021 539 aa15.1■□□□□ 0.01
CSTF2-201ENST00000372972 NYAP1Q6ZVC0 841 aa15.1■□□□□ 0.01
CSTF2-201ENST00000372972 CTAGE1Q96RT6 745 aa15.1■□□□□ 0.01
CSTF2-201ENST00000372972 CTNND2Q9UQB3 1225 aa15.1■□□□□ 0.01
CSTF2-201ENST00000372972 BCS1LQ9Y276 419 aa15.1■□□□□ 0.01
CSTF2-201ENST00000372972 GREB1LQ9C091 1923 aaPredicted RBP15.09■□□□□ 0.01
CSTF2-201ENST00000372972 FAM196BA6NMK8 535 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 USP17L10C9JJH3 530 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 NFKBIEO00221 500 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 PPP1R11O60927 126 aaPredicted RBP15.09■□□□□ 0.01
CSTF2-201ENST00000372972 ENTPD3O75355 529 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 TECP42680 631 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 MRPL12P52815 198 aaKnown RBP15.09■□□□□ 0.01
CSTF2-201ENST00000372972 CXCL9Q07325 125 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 KCNB1Q14721 858 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 CEP135Q66GS9 1140 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 E4F1Q66K89 784 aaPredicted RBP15.09■□□□□ 0.01
CSTF2-201ENST00000372972 IGSF22Q8N9C0 903 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 DCAF4Q8WV16 495 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 HDAC9Q9UKV0 1011 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 RIOK3O14730 519 aaKnown RBP15.09■□□□□ 0.01
CSTF2-201ENST00000372972 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 SLC1A4P43007 532 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 PAK1Q13153 545 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 TMEM179Q6ZVK1 233 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 APTXQ7Z2E3 356 aaKnown RBP15.09■□□□□ 0.01
CSTF2-201ENST00000372972 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 CUL5Q93034 780 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 MTMR9Q96QG7 549 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 PLIN2Q99541 437 aa15.09■□□□□ 0.01
CSTF2-201ENST00000372972 PLCG1P19174 1290 aa15.08■□□□□ 0
CSTF2-201ENST00000372972 CLK2P49760 499 aaKnown RBP15.08■□□□□ 0
CSTF2-201ENST00000372972 DLGAP5Q15398 846 aa15.08■□□□□ 0
CSTF2-201ENST00000372972 CALCRLQ16602 461 aa15.08■□□□□ 0
CSTF2-201ENST00000372972 PTPN21Q16825 1174 aa15.08■□□□□ 0
CSTF2-201ENST00000372972 SLFN13Q68D06 897 aa15.08■□□□□ 0
CSTF2-201ENST00000372972 OGFOD1Q8N543 542 aa15.08■□□□□ 0
CSTF2-201ENST00000372972 AGBL3Q8NEM8 1001 aa15.08■□□□□ 0
CSTF2-201ENST00000372972 KIF2AO00139 706 aaPredicted RBP15.07■□□□□ 0
CSTF2-201ENST00000372972 TXKP42681 527 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 PRCPP42785 496 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 SEPT2Q15019 361 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 ABCB5Q2M3G0 1257 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 FILIP1LQ4L180 1135 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 PPP4R3AQ6IN85 833 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 SIAH1Q8IUQ4 282 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 NELFBQ8WX92 580 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 JDP2Q8WYK2 163 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 GLT8D2Q9H1C3 349 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 PSTPIP2Q9H939 334 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 ADD3Q9UEY8 706 aaKnown RBP15.07■□□□□ 0
CSTF2-201ENST00000372972 ATRNL1Q5VV63 1379 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 GOLGB1Q14789 3259 aaKnown RBP15.07■□□□□ 0
CSTF2-201ENST00000372972 CCP110O43303 1012 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 EDIL3O43854 480 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 KLRC4O43908 158 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 RAD21O60216 631 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 RHOBTB3O94955 611 aa15.07■□□□□ 0
CSTF2-201ENST00000372972 TNNI2P48788 182 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms