RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 KANSL2Q9H9L4 492 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 PCK1P35558 622 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 BRD3Q15059 726 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 TBC1D9BQ66K14 1250 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 DDX25Q9UHL0 483 aaKnown RBP14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 TRPM1Q7Z4N2 1603 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 H7C1W4 665 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 TNFAIP3P21580 790 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 POLA2Q14181 598 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.65□□□□□ -0.062e-6■□□□□ 9
RAPGEF1-201ENST00000372189 PI4KBQ9UBF8 816 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 STAP2Q9UGK3 403 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 PCDHA1Q9Y5I3 950 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 KRT19P08727 400 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 PLA2G4DQ86XP0 818 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 GPR101Q96P66 508 aaPredicted RBP14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 SERPINB13Q9UIV8 391 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 SERPINI2O75830 405 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 FYB2Q5VWT5 728 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 NEK8Q86SG6 692 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 AMNQ9BXJ7 453 aa14.65□□□□□ -0.06
RAPGEF1-201ENST00000372189 PFKFB2O60825 505 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 CYP19A1P11511 503 aaPredicted RBP14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 PTPN12Q05209 780 aaKnown RBP14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 PAK2Q13177 524 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 CCDC38Q502W7 563 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 TSKSQ9UJT2 592 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 FAM160B1Q5W0V3 765 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 ZBTB8OSQ8IWT0 167 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 PRPF6O94906 941 aaKnown RBP14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 FOSP01100 380 aaPredicted RBP14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 ATP6V1E2Q96A05 226 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 KRT9P35527 623 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 TRMT2AQ8IZ69 625 aaKnown RBP14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 USH1CQ9Y6N9 552 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 DIP2CQ9Y2E4 1556 aa14.64□□□□□ -0.07
RAPGEF1-201ENST00000372189 ZFXP17010 805 aaPredicted RBP14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 MECOMQ03112 1051 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 ASIC2Q16515 512 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 FAM173BQ6P4H8 233 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 IWS1Q96ST2 819 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 CSRNP2Q9H175 543 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 PCDHA12Q9UN75 941 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 USP17L8P0C7I0 530 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 NELFCDQ8IXH7 590 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 ZSWIM6Q9HCJ5 1215 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 QRICH2Q9H0J4 1663 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 TECP42680 631 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 POSTNQ15063 836 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 XKR9Q5GH70 373 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 LIN9Q5TKA1 542 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 RPGRIP1Q96KN7 1286 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 PEX19P40855 299 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 ZSCAN26Q16670 478 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 LCORLQ8N3X6 602 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 SLC10A4Q96EP9 437 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 NRBP2Q9NSY0 501 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 KCTD1Q719H9 257 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 MIGA2Q7L4E1 593 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 TAOK1Q7L7X3 1001 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 NBPF3Q9H094 633 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 ANTXR1Q9H6X2 564 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 MYO3BQ8WXR4 1341 aa14.63□□□□□ -0.07
RAPGEF1-201ENST00000372189 PTCH1Q13635 1447 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 KCNQ2O43526 872 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 ADD1P35611 737 aaKnown RBP14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 MTX1Q13505 466 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 MTMR3Q13615 1198 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 GPBP1Q86WP2 473 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 POLE3Q9NRF9 147 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 CEP85LQ5SZL2 805 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 TXNDC16Q9P2K2 825 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 NFE2L3Q9Y4A8 694 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 LMTK2Q8IWU2 1503 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 PALM3A6NDB9 673 aaPredicted RBP14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 HSP90AA5PQ58FG0 334 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 CFAP157Q5JU67 520 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 ZNF280CQ8ND82 737 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 CABS1Q96KC9 395 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 SPATS2Q86XZ4 545 aaKnown RBP14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 NR1I2O75469 434 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 P4HA1P13674 534 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 NEDD9Q14511 834 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 CCDC51Q96ER9 411 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 PALMDQ9NP74 551 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 PLCB1Q9NQ66 1216 aa14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 ADD3Q9UEY8 706 aaKnown RBP14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 FBXO2Q9UK22 296 aaPredicted RBP14.62□□□□□ -0.07
RAPGEF1-201ENST00000372189 OR52Z1P0C646 297 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 BASP1P80723 227 aaKnown RBP14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 CLUL1Q15846 466 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 TSNAXIP1Q2TAA8 658 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 AP5M1Q9H0R1 490 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 USP31Q70CQ4 1352 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 TTC36A6NLP5 189 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 BMP3P12645 472 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms