RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ABCB5Q2M3G0 1257 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 KRBA2Q6ZNG9 492 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 MFSD6Q6ZSS7 791 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 TBC1D10CQ8IV04 446 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 SCYL3Q8IZE3 742 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 MLKLQ8NB16 471 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 ENOX1Q8TC92 643 aaKnown RBP12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 NBPF3Q9H094 633 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 ZNF287Q9HBT7 754 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 SNCAIPQ9Y6H5 919 aa12.95□□□□□ -0.34
TSPAN1-201ENST00000372003 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 AKR1B1P15121 316 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 RASA1P20936 1047 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 OAS2P29728 719 aaKnown RBP12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 TXLNAP40222 546 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 FAM47AQ5JRC9 791 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 AKNAD1Q5T1N1 836 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 NT5DC1Q5TFE4 455 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 SPECC1LQ69YQ0 1117 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 CYP4F22Q6NT55 531 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 RALYLQ86SE5 291 aaKnown RBP12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 KIFC2Q96AC6 838 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 OTUD5Q96G74 571 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
TSPAN1-201ENST00000372003 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 MAP2K7O14733 419 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 GNG11P61952 73 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 SHC4Q6S5L8 630 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 CEP112Q8N8E3 955 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 GOLGA5Q8TBA6 731 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 OPTNQ96CV9 577 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 CCDC17Q96LX7 622 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 PANX2Q96RD6 677 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 MAP3K14Q99558 947 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 FUT8Q9BYC5 575 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 ZBTB21Q9ULJ3 1066 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 ZHX2Q9Y6X8 837 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 ROBO3Q96MS0 1386 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 NAV1Q8NEY1 1877 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 CDK5RAP2Q96SN8 1893 aa12.93□□□□□ -0.34
TSPAN1-201ENST00000372003 UNCXA6NJT0 531 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 RASSF10A6NK89 507 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 TSPY2A6NKD2 308 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 ASNSP08243 561 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 ZNF18P17022 549 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 PTPRAP18433 802 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 TFAP4Q01664 338 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 SEPT2Q15019 361 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 NOL9Q5SY16 702 aaKnown RBP12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 PARD6BQ9BYG5 372 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 RNF41Q9H4P4 317 aaPredicted RBP12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 FANCLQ9NW38 375 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 FOCADQ5VW36 1801 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 BAZ2AQ9UIF9 1905 aaKnown RBP12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 PAPPA2Q9BXP8 1791 aa12.92□□□□□ -0.34
TSPAN1-201ENST00000372003 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 B4E1Z4 1266 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 FANCGO15287 622 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 SASH3O75995 380 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 TSPY3P0CV98 308 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 TSPY8P0CW00 308 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 ERCC5P28715 1186 aaPredicted RBP12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 ANTXR2P58335 489 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 OTUD7BQ6GQQ9 843 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 ERO1BQ86YB8 467 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 RASAL3Q86YV0 1011 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 CLEC10AQ8IUN9 316 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 TC2NQ8N9U0 490 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 CNNM3Q8NE01 707 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 NKX2-3Q8TAU0 364 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 CCDC102AQ96A19 550 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 HHIPL1Q96JK4 782 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 CAPNS2Q96L46 248 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 ALG1Q9BT22 464 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 RAB21Q9UL25 225 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 TAOK2Q9UL54 1235 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 KCNH3Q9ULD8 1083 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 MYH1P12882 1939 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 SPDYE5A6NIY4 337 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 TRIM75PA6NK02 468 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 USP17L5A8MUK1 530 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 IRF6O14896 467 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 ORC4O43929 436 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 ERLIN1O75477 346 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 RPS6KA5O75582 802 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 IVLP07476 585 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 FGRP09769 529 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 CCDC175P0C221 793 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 CAPN2P17655 700 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 GUCY1A2P33402 732 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 GJA5P36382 358 aa12.91□□□□□ -0.34
TSPAN1-201ENST00000372003 SARSP49591 514 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms