RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 NPLOC4Q8TAT6 608 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 KCNF1Q9H3M0 494 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 TSPY26PQ9H489 355 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 CCDC196A0A1B0GTZ2 297 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 GOLGA6L6A8MZA4 724 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 VWA5AO00534 786 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 CYTH3O43739 400 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 PPP1R12BO60237 982 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-204ENST00000369530 FKTNO75072 461 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 COBLO75128 1261 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 ADAMTS4O75173 837 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 CYP21A2P08686 494 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 MCMDC2Q4G0Z9 681 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 CCDC129Q6ZRS4 1044 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 CCDC84Q86UT8 332 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-204ENST00000369530 MSL3Q8N5Y2 521 aaKnown RBP7.91□□□□□ -1.14
CSDE1-204ENST00000369530 TMX4Q9H1E5 349 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-204ENST00000369530 PORCNQ9H237 461 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 PPP1R9AQ9ULJ8 1098 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 GNEQ9Y223 722 aaKnown RBP7.91□□□□□ -1.14
CSDE1-204ENST00000369530 WDR46O15213 610 aaKnown RBP7.91□□□□□ -1.14
CSDE1-204ENST00000369530 NPHP1O15259 732 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 MIGA1Q8NAN2 632 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 CCDC17Q96LX7 622 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 SENP2Q9HC62 589 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 RIPK3Q9Y572 518 aa7.91□□□□□ -1.14
CSDE1-204ENST00000369530 PEX10O60683 326 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 MAGEA9P43362 315 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 CDK7P50613 346 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 HSD17B4P51659 736 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 HERVK_113P62684 666 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 RBL2Q08999 1139 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 MTMR2Q13614 643 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 SGMS1Q86VZ5 419 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 RNF217Q8TC41 542 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 ITFG2Q969R8 447 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 ZBTB9Q96C00 473 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.9□□□□□ -1.14
CSDE1-204ENST00000369530 BAG3O95817 575 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 CYP2C8P10632 490 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 PTPREP23469 700 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 GCLCP48506 637 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-204ENST00000369530 SEPT2Q15019 361 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 B3GNT9Q6UX72 402 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 DZIP1Q86YF9 867 aaKnown RBP7.9□□□□□ -1.14
CSDE1-204ENST00000369530 EMID1Q96A84 441 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-204ENST00000369530 TTC14Q96N46 770 aa7.9□□□□□ -1.14
CSDE1-204ENST00000369530 A1CFQ9NQ94 594 aaKnown RBP7.9□□□□□ -1.14
CSDE1-204ENST00000369530 SYNGAP1Q96PV0 1343 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L12C9JPN9 530 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L21D6R901 530 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 CDC45O75419 566 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 GH2P01242 217 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 ERVK-9P63128 1117 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 ERVK-24P63145 666 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 TCP10Q12799 353 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 NTRK3Q16288 839 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 TAPT1Q6NXT6 567 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 TMEM87AQ8NBN3 555 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 SLC10A4Q96EP9 437 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 CEP95Q96GE4 821 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 FAM210AQ96ND0 272 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 RABGAP1Q9Y3P9 1069 aa7.9□□□□□ -1.15
CSDE1-204ENST00000369530 ADAMTS3O15072 1205 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 RGS20O76081 388 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 SNAI1O95863 264 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-204ENST00000369530 PDHBP11177 359 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 EEF2P13639 858 aaKnown RBP7.89□□□□□ -1.15
CSDE1-204ENST00000369530 TNNT3P45378 269 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-204ENST00000369530 RCAN1P53805 252 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 GPNMBQ14956 572 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 ECM1Q16610 540 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 SYT10Q6XYQ8 523 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 NOL8Q76FK4 1167 aaKnown RBP7.89□□□□□ -1.15
CSDE1-204ENST00000369530 OTUD6BQ8N6M0 293 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 FBXO18Q8NFZ0 1043 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 GOLGA5Q8TBA6 731 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 CD99L2Q8TCZ2 262 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 BORCS6Q96GS4 357 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 LY9Q9HBG7 655 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 SUFUQ9UMX1 484 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 PTCH2Q9Y6C5 1203 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 ZRANB2O95218 330 aaKnown RBP eCLIP7.89□□□□□ -1.15
CSDE1-204ENST00000369530 BMS1Q14692 1282 aaKnown RBP7.89□□□□□ -1.15
CSDE1-204ENST00000369530 CLEC10AQ8IUN9 316 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 FHOD1Q9Y613 1164 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 TRIP12Q14669 1992 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-204ENST00000369530 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L10C9JJH3 530 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 BMP8BP34820 402 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 SP3Q02447 781 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 CCDC96Q2M329 555 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 EP400NLQ6ZTU2 488 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 GOLGA6L1Q8N7Z2 621 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 ANKLE1Q8NAG6 615 aa7.89□□□□□ -1.15
CSDE1-204ENST00000369530 ABT1Q9ULW3 272 aaKnown RBP7.89□□□□□ -1.15
CSDE1-204ENST00000369530 KMT2EQ8IZD2 1858 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 CD2BP2O95400 341 aaKnown RBP7.88□□□□□ -1.15
CSDE1-204ENST00000369530 MCTP2Q6DN12 878 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 NEUROD6Q96NK8 337 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms