RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 AK8Q96MA6 479 aa28.13■■■□□ 2.09
CLK2-203ENST00000368361 ZBTB12Q9Y330 459 aaPredicted RBP28.13■■■□□ 2.09
CLK2-203ENST00000368361 CLRN2A0PK11 232 aa28.13■■■□□ 2.09
CLK2-203ENST00000368361 ORC2Q13416 577 aaPredicted RBP28.13■■■□□ 2.09
CLK2-203ENST00000368361 GMLQ99445 158 aa28.13■■■□□ 2.09
CLK2-203ENST00000368361 SYNRGQ9UMZ2 1314 aa28.13■■■□□ 2.09
CLK2-203ENST00000368361 COL2A1P02458 1487 aaPredicted RBP28.12■■■□□ 2.09
CLK2-203ENST00000368361 TECP42680 631 aa28.12■■■□□ 2.09
CLK2-203ENST00000368361 CLK2P49760 499 aaKnown RBP28.12■■■□□ 2.09
CLK2-203ENST00000368361 RRP1BQ14684 758 aaKnown RBP28.12■■■□□ 2.09
CLK2-203ENST00000368361 PTPN21Q16825 1174 aa28.12■■■□□ 2.09
CLK2-203ENST00000368361 CCDC150Q8NCX0 1101 aa28.12■■■□□ 2.09
CLK2-203ENST00000368361 LRRC15Q8TF66 581 aa28.12■■■□□ 2.09
CLK2-203ENST00000368361 SLC16A10Q8TF71 515 aa28.12■■■□□ 2.09
CLK2-203ENST00000368361 RPN1P04843 607 aaKnown RBP28.11■■■□□ 2.09
CLK2-203ENST00000368361 CABP7Q86V35 215 aa28.11■■■□□ 2.09
CLK2-203ENST00000368361 VSTM4Q8IW00 320 aa28.11■■■□□ 2.09
CLK2-203ENST00000368361 CUL5Q93034 780 aa28.11■■■□□ 2.09
CLK2-203ENST00000368361 TDP2O95551 362 aa28.11■■■□□ 2.09
CLK2-203ENST00000368361 GH2P01242 217 aa28.11■■■□□ 2.09
CLK2-203ENST00000368361 TNNI2P48788 182 aa28.11■■■□□ 2.09
CLK2-203ENST00000368361 QRICH1Q2TAL8 776 aa28.11■■■□□ 2.09
CLK2-203ENST00000368361 SPATA1Q5VX52 437 aa28.11■■■□□ 2.09
CLK2-203ENST00000368361 TMOD2Q9NZR1 351 aa28.11■■■□□ 2.09
CLK2-203ENST00000368361 F5H6K3 240 aa28.1■■■□□ 2.09
CLK2-203ENST00000368361 SLC37A4O43826 429 aa28.1■■■□□ 2.09
CLK2-203ENST00000368361 SFPQP23246 707 aaKnown RBP eCLIP28.1■■■□□ 2.09
CLK2-203ENST00000368361 KLRC3Q07444 240 aa28.1■■■□□ 2.09
CLK2-203ENST00000368361 MTMR9Q96QG7 549 aa28.1■■■□□ 2.09
CLK2-203ENST00000368361 ARFGEF1Q9Y6D6 1849 aa28.1■■■□□ 2.09
CLK2-203ENST00000368361 RBM26Q5T8P6 1007 aaKnown RBP28.1■■■□□ 2.09
CLK2-203ENST00000368361 HDAC9Q9UKV0 1011 aa28.1■■■□□ 2.09
CLK2-203ENST00000368361 TXKP42681 527 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 DLGAP5Q15398 846 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 OGFOD1Q8N543 542 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 PSTPIP2Q9H939 334 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 KBTBD4Q9NVX7 518 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 CTNND2Q9UQB3 1225 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 KIF13BQ9NQT8 1826 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 PLCG1P19174 1290 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 MRPL12P52815 198 aaKnown RBP28.09■■■□□ 2.09
CLK2-203ENST00000368361 CDC37Q16543 378 aaPredicted RBP28.09■■■□□ 2.09
CLK2-203ENST00000368361 CALCRLQ16602 461 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 ZNF658Q5TYW1 1059 aaPredicted RBP28.09■■■□□ 2.09
CLK2-203ENST00000368361 IGSF22Q8N9C0 903 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 GMCL1P1Q8NEA9 526 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 NUP88Q99567 741 aaPredicted RBP28.09■■■□□ 2.09
CLK2-203ENST00000368361 RMND1Q9NWS8 449 aa28.09■■■□□ 2.09
CLK2-203ENST00000368361 ZNF70Q9UC06 446 aaPredicted RBP28.09■■■□□ 2.09
CLK2-203ENST00000368361 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.08■■■□□ 2.09
CLK2-203ENST00000368361 NDUFB10O96000 172 aa28.07■■■□□ 2.08
CLK2-203ENST00000368361 C16orf45Q96MC5 204 aaPredicted RBP28.07■■■□□ 2.08
CLK2-203ENST00000368361 TPM2P07951 284 aa28.07■■■□□ 2.08
CLK2-203ENST00000368361 MMTAG2Q9BU76 263 aaKnown RBP28.07■■■□□ 2.08
CLK2-203ENST00000368361 HERC5Q9UII4 1024 aaKnown RBP28.07■■■□□ 2.08
CLK2-203ENST00000368361 PCDHA1Q9Y5I3 950 aa28.07■■■□□ 2.08
CLK2-203ENST00000368361 USP27XA6NNY8 438 aa28.06■■■□□ 2.08
CLK2-203ENST00000368361 COBLO75128 1261 aa28.06■■■□□ 2.08
CLK2-203ENST00000368361 GDAQ9Y2T3 454 aa28.06■■■□□ 2.08
CLK2-203ENST00000368361 MYH7BA7E2Y1 1941 aa28.06■■■□□ 2.08
CLK2-203ENST00000368361 GMCL1Q96IK5 515 aa28.06■■■□□ 2.08
CLK2-203ENST00000368361 CUEDC2Q9H467 287 aa28.06■■■□□ 2.08
CLK2-203ENST00000368361 A0A1W2PRG0 241 aa28.05■■■□□ 2.08
CLK2-203ENST00000368361 MYL1P05976 194 aa28.05■■■□□ 2.08
CLK2-203ENST00000368361 DHX8Q14562 1220 aaKnown RBP28.05■■■□□ 2.08
CLK2-203ENST00000368361 TPD52L1Q16890 204 aaPredicted RBP28.05■■■□□ 2.08
CLK2-203ENST00000368361 CDKAL1Q5VV42 579 aa28.05■■■□□ 2.08
CLK2-203ENST00000368361 FAM151AQ8WW52 585 aa28.05■■■□□ 2.08
CLK2-203ENST00000368361 ZNRF3Q9ULT6 936 aa28.05■■■□□ 2.08
CLK2-203ENST00000368361 CNTNAP1P78357 1384 aa28.05■■■□□ 2.08
CLK2-203ENST00000368361 UQCRHLA0A096LP55 91 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L15C9J2P7 530 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L13C9JLJ4 530 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L11C9JVI0 530 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L18D6R9N7 530 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L22D6RA61 530 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L17D6RBQ6 530 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L19D6RCP7 530 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L20D6RJB6 530 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 UQCRHP07919 91 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L24Q0WX57 530 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 SPDYE2Q495Y8 402 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 USP17L6PQ6QN14 398 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 APTXQ7Z2E3 356 aaKnown RBP28.04■■■□□ 2.08
CLK2-203ENST00000368361 NIM1KQ8IY84 436 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 VPS33BQ9H267 617 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 KLRC4O43908 158 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 FXR2P51116 673 aaKnown RBP eCLIP28.04■■■□□ 2.085e-9■□□□□ 10
CLK2-203ENST00000368361 SNAP25P60880 206 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 KMT5BQ4FZB7 885 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 PPP4R3AQ6IN85 833 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 MAPK8IP1Q9UQF2 711 aa28.04■■■□□ 2.08
CLK2-203ENST00000368361 ATF5Q9Y2D1 282 aaPredicted RBP28.04■■■□□ 2.08
CLK2-203ENST00000368361 PAK1Q13153 545 aa28.03■■■□□ 2.08
CLK2-203ENST00000368361 PRIMPOLQ96LW4 560 aa28.03■■■□□ 2.08
CLK2-203ENST00000368361 MAGEF1Q9HAY2 307 aa28.03■■■□□ 2.08
CLK2-203ENST00000368361 VEZTQ9HBM0 779 aa28.03■■■□□ 2.08
CLK2-203ENST00000368361 LRWD1Q9UFC0 647 aa28.03■■■□□ 2.08
CLK2-203ENST00000368361 RWDD2AQ9UIY3 292 aa28.03■■■□□ 2.08
CLK2-203ENST00000368361 A0A1B0GTH6 734 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms