RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PRRT2Q7Z6L0 340 aaPredicted RBP13.06□□□□□ -0.32
USF1-201ENST00000368019 ZNF384Q8TF68 577 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 DDX4Q9NQI0 724 aaKnown RBP13.06□□□□□ -0.32
USF1-201ENST00000368019 NAP1L2Q9ULW6 460 aaPredicted RBP13.06□□□□□ -0.32
USF1-201ENST00000368019 PPP2R2CQ9Y2T4 447 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 AFG3L2Q9Y4W6 797 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 NDUFB9Q9Y6M9 179 aa13.06□□□□□ -0.32
USF1-201ENST00000368019 ATAD5Q96QE3 1844 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 GPR75-ASB3A0A0A6YYF3 556 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 CHGBP05060 677 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 POLR3DP05423 398 aaPredicted RBP13.05□□□□□ -0.32
USF1-201ENST00000368019 SLURP2P0DP57 97 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 CYP2C8P10632 490 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 ZNF18P17022 549 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 ERCC5P28715 1186 aaPredicted RBP13.05□□□□□ -0.32
USF1-201ENST00000368019 CASQ1P31415 396 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 GRK4P32298 578 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 LIFRP42702 1097 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 FXR1P51114 621 aaKnown RBP eCLIP13.05□□□□□ -0.32
USF1-201ENST00000368019 RHBDL3P58872 404 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 BRD3Q15059 726 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 UBE3CQ15386 1083 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 KRT40Q6A162 431 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 UBE2Q1Q7Z7E8 422 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 XAGE2Q96GT9 111 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 CCDC34Q96HJ3 373 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 PARK7Q99497 189 aaKnown RBP13.05□□□□□ -0.32
USF1-201ENST00000368019 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.05□□□□□ -0.32
USF1-201ENST00000368019 MRFAP1Q9Y605 127 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 ZHX2Q9Y6X8 837 aa13.05□□□□□ -0.32
USF1-201ENST00000368019 MYO5AQ9Y4I1 1855 aaKnown RBP13.05□□□□□ -0.32
USF1-201ENST00000368019 RANBP2P49792 3224 aaKnown RBP13.05□□□□□ -0.32
USF1-201ENST00000368019 CCDC151A5D8V7 595 aa13.04□□□□□ -0.32
USF1-201ENST00000368019 CTNND1O60716 968 aaKnown RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 ECM2O94769 699 aaPredicted RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 METAP2P50579 478 aaKnown RBP eCLIP13.04□□□□□ -0.32
USF1-201ENST00000368019 TRIM29Q14134 588 aa13.04□□□□□ -0.32
USF1-201ENST00000368019 SPTY2D1Q68D10 685 aaPredicted RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 FASTKD5Q7L8L6 764 aaKnown RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 METTL16Q86W50 562 aaKnown RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 DZIP1Q86YF9 867 aaKnown RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 SLF2Q8IX21 1173 aa13.04□□□□□ -0.32
USF1-201ENST00000368019 HNRNPLLQ8WVV9 542 aaKnown RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 BAG1Q99933 345 aaPredicted RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 ABCF2Q9UG63 623 aa13.04□□□□□ -0.32
USF1-201ENST00000368019 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
USF1-201ENST00000368019 SLC45A1Q9Y2W3 748 aa13.04□□□□□ -0.32
USF1-201ENST00000368019 MYPNQ86TC9 1320 aa13.04□□□□□ -0.32
USF1-201ENST00000368019 A0A087WWV3 80 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 GPAA1O43292 621 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 TBC1D12O60347 775 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 URI1O94763 535 aaPredicted RBP13.03□□□□□ -0.32
USF1-201ENST00000368019 GJB1P08034 283 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 FECHP22830 423 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 ADD2P35612 726 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 BTDP43251 543 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 GJA8P48165 433 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 MDM2Q00987 491 aaPredicted RBP13.03□□□□□ -0.32
USF1-201ENST00000368019 MECOMQ03112 1051 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 PRKCZQ05513 592 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 NTRK3Q16288 839 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 RILPL1Q5EBL4 403 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 SPECC1LQ69YQ0 1117 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 CC2D1AQ6P1N0 951 aaPredicted RBP13.03□□□□□ -0.32
USF1-201ENST00000368019 APOA5Q6Q788 366 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 ZSCAN29Q8IWY8 852 aaPredicted RBP13.03□□□□□ -0.32
USF1-201ENST00000368019 KRI1Q8N9T8 703 aaKnown RBP13.03□□□□□ -0.32
USF1-201ENST00000368019 CNNM3Q8NE01 707 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 RAET1EQ8TD07 263 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 GOLGA1Q92805 767 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 CCDC51Q96ER9 411 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 PANX2Q96RD6 677 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.03□□□□□ -0.32
USF1-201ENST00000368019 CARD6Q9BX69 1037 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 PICK1Q9NRD5 415 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 GABRQQ9UN88 632 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 CDK5RAP2Q96SN8 1893 aa13.03□□□□□ -0.32
USF1-201ENST00000368019 LOC285556D6RIA3 1793 aa13.02□□□□□ -0.32
USF1-201ENST00000368019 H0YGN5 161 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 BIN1O00499 593 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 CCL5P13501 91 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 ATP1A3P13637 1013 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 PTPREP23469 700 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 FCGRTP55899 365 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 MORC3Q14149 939 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 CEP112Q8N8E3 955 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 IQUBQ8NA54 791 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 ERCC4Q92889 916 aaPredicted RBP13.02□□□□□ -0.33
USF1-201ENST00000368019 EXOC4Q96A65 974 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 KIFC2Q96AC6 838 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 FOXP1Q9H334 677 aaPredicted RBP13.02□□□□□ -0.33
USF1-201ENST00000368019 ARFGAP3Q9NP61 516 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 CEP131Q9UPN4 1083 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms