RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LSM14BQ9BX40 385 aaKnown RBP13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 AS3MTQ9HBK9 375 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 RNASELQ05823 741 aaKnown RBP13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 SLFNL1Q499Z3 407 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 FAM26FQ5R3K3 315 aa13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 CNOT10Q9H9A5 744 aaKnown RBP13.21□□□□□ -0.29
CDC42BPA-203ENST00000366766 PANK4Q9NVE7 773 aa13.21□□□□□ -0.3
CDC42BPA-203ENST00000366766 PPP2R5AQ15172 486 aa13.21□□□□□ -0.3
CDC42BPA-203ENST00000366766 EPHB4P54760 987 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 PPP1R13BQ96KQ4 1090 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 LARP4BQ92615 738 aaKnown RBP13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 TUBGCP2Q9BSJ2 902 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 FAM114A2Q9NRY5 505 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 KLHL14Q9P2G3 628 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 GIPC1O14908 333 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 ADD2P35612 726 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 CYP21A2P08686 494 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 MRPS9P82933 396 aaKnown RBP13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 PDZD4Q76G19 769 aaPredicted RBP13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 H2AFZP0C0S5 128 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 TROVE2P10155 538 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 ZNF658Q5TYW1 1059 aaPredicted RBP13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 H2AFVQ71UI9 128 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 BTBD18B2RXH4 712 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 CHMP2AO43633 222 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 AMNQ9BXJ7 453 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 MAN2A1Q16706 1144 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 THAP9Q9H5L6 903 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 OTUD7BQ6GQQ9 843 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 SLC5A4Q9NY91 659 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 PDE6CP51160 858 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 RUBCNQ92622 972 aa13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 JPH2Q9BR39 696 aaPredicted RBP13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 SRPRBQ9Y5M8 271 aaKnown RBP13.2□□□□□ -0.3
CDC42BPA-203ENST00000366766 SMIM23A6NLE4 172 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 PRPF3O43395 683 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 TTLL1O95922 423 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 VSIG1Q86XK7 387 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 MAPKAPK5Q8IW41 473 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 ZNF277Q9NRM2 450 aaPredicted RBP13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 POLR2MP0CAP2 368 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 NECTIN1Q15223 517 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 TRMT44Q8IYL2 757 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 FAM212AQ96EL1 285 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 CAPS2Q9BXY5 557 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 ANKRD20A3Q5VUR7 823 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 SH2B2O14492 632 aaPredicted RBP13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 ALS2CLQ60I27 953 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 EXOC4Q96A65 974 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 CDHR1Q96JP9 859 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 LUC7L3O95232 432 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 VSTM4Q8IW00 320 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 DDX23Q9BUQ8 820 aaKnown RBP13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 MXD3Q9BW11 206 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 EXOC3L4Q17RC7 722 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
CDC42BPA-203ENST00000366766 PPP1R21Q6ZMI0 780 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 DHX36Q9H2U1 1008 aaKnown RBP13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 EIF6P56537 245 aaKnown RBP13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 NIM1KQ8IY84 436 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 PROM2Q8N271 834 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 PBKQ96KB5 322 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 WDR11Q9BZH6 1224 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 IVNS1ABPQ9Y6Y0 642 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 CCDC38Q502W7 563 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 CEP85LQ5SZL2 805 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 KRT15P19012 456 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 LONRF2Q1L5Z9 754 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 MIER3Q7Z3K6 550 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 TRIM6Q9C030 488 aaPredicted RBP13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 EIF3BP55884 814 aaKnown RBP13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 PPP4R1Q8TF05 950 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 PSMC4P43686 418 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 ZBED6P86452 979 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 CUL1Q13616 776 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 PKP1Q13835 747 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 ZBTB8OSQ8IWT0 167 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 RIMBP2O15034 1052 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 ARL1P40616 181 aaPredicted RBP13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 CHRNDQ07001 517 aa13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 GLE1Q53GS7 698 aaKnown RBP13.18□□□□□ -0.3
CDC42BPA-203ENST00000366766 KIF3CO14782 793 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 PCK1P35558 622 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 ZNF354CQ86Y25 554 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 HADHQ16836 314 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 CNOT6LQ96LI5 555 aaKnown RBP13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 BBOX1O75936 387 aa13.17□□□□□ -0.3
CDC42BPA-203ENST00000366766 PI4K2BQ8TCG2 481 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms