RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PIH1D3Q9NQM4 214 aaKnown RBP14.85□□□□□ -0.03
LDB3-202ENST00000361373 FAM207AQ9NSI2 230 aaPredicted RBP14.85□□□□□ -0.03
LDB3-202ENST00000361373 ARMCX5Q6P1M9 558 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 TRMT44Q8IYL2 757 aaKnown RBP14.85□□□□□ -0.03
LDB3-202ENST00000361373 PI4K2BQ8TCG2 481 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 ATRIPQ8WXE1 791 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 SLC7A3Q8WY07 619 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 FAM81BQ96LP2 452 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 CROCC2H7BZ55 1655 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 RCAN1P53805 252 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 SEPT2Q15019 361 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 CFAP221Q4G0U5 840 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 PEX26Q7Z412 305 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 NACC1Q96RE7 527 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 ZNF577Q9BSK1 485 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 IFIH1Q9BYX4 1025 aaKnown RBP14.85□□□□□ -0.03
LDB3-202ENST00000361373 NACA2Q9H009 215 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 MINPP1Q9UNW1 487 aa14.85□□□□□ -0.03
LDB3-202ENST00000361373 A6NNZ2 444 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 TUBB8Q3ZCM7 444 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 SIRT2Q8IXJ6 389 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 FBF1Q8TES7 1133 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 LARP4BQ92615 738 aaKnown RBP14.84□□□□□ -0.03
LDB3-202ENST00000361373 TMEM63CQ9P1W3 806 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 ZSWIM5Q9P217 1185 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 BPIFB4P59827 614 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.84□□□□□ -0.03
LDB3-202ENST00000361373 PRKAB2O43741 272 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 MMP1P03956 469 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 CDK8P49336 464 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 ZBTB16Q05516 673 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 RETREG2Q8NC44 543 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 DHTKD1Q96HY7 919 aaPredicted RBP14.84□□□□□ -0.03
LDB3-202ENST00000361373 LSM14BQ9BX40 385 aaKnown RBP14.84□□□□□ -0.03
LDB3-202ENST00000361373 XPO4Q9C0E2 1151 aaKnown RBP14.84□□□□□ -0.03
LDB3-202ENST00000361373 RIC8AQ9NPQ8 531 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 NKIRAS1Q9NYS0 192 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 ADAM9Q13443 819 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 RIOK1Q9BRS2 568 aaKnown RBP14.84□□□□□ -0.03
LDB3-202ENST00000361373 SH3GLB2Q9NR46 395 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 PNMA3Q9UL41 463 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 CD2APQ9Y5K6 639 aa14.84□□□□□ -0.03
LDB3-202ENST00000361373 WDR19Q8NEZ3 1342 aa14.83□□□□□ -0.03
LDB3-202ENST00000361373 TLDC2A0PJX2 215 aa14.83□□□□□ -0.03
LDB3-202ENST00000361373 POLR2BP30876 1174 aaKnown RBP14.83□□□□□ -0.03
LDB3-202ENST00000361373 NECTIN1Q15223 517 aa14.83□□□□□ -0.03
LDB3-202ENST00000361373 DIXDC1Q155Q3 683 aa14.83□□□□□ -0.03
LDB3-202ENST00000361373 PI16Q6UXB8 463 aa14.83□□□□□ -0.03
LDB3-202ENST00000361373 SPICE1Q8N0Z3 855 aa14.83□□□□□ -0.03
LDB3-202ENST00000361373 AP5M1Q9H0R1 490 aa14.83□□□□□ -0.03
LDB3-202ENST00000361373 SUGCTQ9HAC7 445 aa14.83□□□□□ -0.03
LDB3-202ENST00000361373 ODR4Q5SWX8 454 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 RAB3IL1Q8TBN0 382 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 SMC6Q96SB8 1091 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 KIAA1024Q9UPX6 916 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 DLC1Q96QB1 1528 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 PNMA6FA0A0J9YX94 578 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 ARHGAP44Q17R89 818 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 MIS18BP1Q6P0N0 1132 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 RDH13Q8NBN7 331 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 TRIM58Q8NG06 486 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 MRFAP1L1Q96HT8 127 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 UIMC1Q96RL1 719 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 PTPRUQ92729 1446 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 TMEM191BP0C7N4 346 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 CCND2P30279 289 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 MCAMP43121 646 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 KIF23Q02241 960 aaPredicted RBP14.83□□□□□ -0.04
LDB3-202ENST00000361373 DCAF4Q8WV16 495 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 STAG1Q8WVM7 1258 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 SELENOSQ9BQE4 189 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 NLRC4Q9NPP4 1024 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 HESX1Q9UBX0 185 aa14.83□□□□□ -0.04
LDB3-202ENST00000361373 AGLP35573 1532 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 CEP104O60308 925 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 GDF11O95390 407 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 RC3H1Q5TC82 1133 aaKnown RBP14.82□□□□□ -0.04
LDB3-202ENST00000361373 CD209Q9NNX6 404 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 LRRIQ4A6NIV6 560 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 UTP14CQ5TAP6 766 aaKnown RBP14.82□□□□□ -0.04
LDB3-202ENST00000361373 KCTD1Q719H9 257 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 PIGSQ96S52 555 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 NBPF3Q9H094 633 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
LDB3-202ENST00000361373 SUGT1Q9Y2Z0 365 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 BZW2Q9Y6E2 419 aaKnown RBP14.82□□□□□ -0.04
LDB3-202ENST00000361373 VPS72Q15906 364 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 PPP1R2P3Q6NXS1 205 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 RCOR1Q9UKL0 485 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 AMFRQ9UKV5 643 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 FAM184BQ9ULE4 1060 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 CLIC4Q9Y696 253 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 ARL6IP4Q66PJ3 421 aaKnown RBP14.82□□□□□ -0.04
LDB3-202ENST00000361373 TBCKQ8TEA7 893 aa14.82□□□□□ -0.04
LDB3-202ENST00000361373 ARHGEF1Q92888 912 aaKnown RBP14.82□□□□□ -0.04
LDB3-202ENST00000361373 CNGA1P29973 690 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 NDUFA8P51970 172 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 LGSNQ5TDP6 509 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 SLF1Q9BQI6 1058 aa14.81□□□□□ -0.04
LDB3-202ENST00000361373 CDC42BPBQ9Y5S2 1711 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms