RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 NR1I3Q14994 352 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 RAD9BQ6WBX8 426 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 TEX11Q8IYF3 940 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 ZNF579Q8NAF0 562 aaKnown RBP10.46□□□□□ -0.73
SMG6-202ENST00000354901 KIFC2Q96AC6 838 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 CTAGE9A4FU28 777 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 N4BP3O15049 544 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 PRPF3O43395 683 aaKnown RBP10.46□□□□□ -0.73
SMG6-202ENST00000354901 CCDC175P0C221 793 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 MATR3P43243 847 aaKnown RBP eCLIP10.46□□□□□ -0.73
SMG6-202ENST00000354901 CUL4BQ13620 913 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 NT5DC1Q5TFE4 455 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 THOC1Q96FV9 657 aaKnown RBP10.46□□□□□ -0.73
SMG6-202ENST00000354901 FAXDC2Q96IV6 333 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 MCM9Q9NXL9 1143 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 CDC23Q9UJX2 597 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 KIF4AO95239 1232 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 USP17L8P0C7I0 530 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 HMGB2P26583 209 aaKnown RBP10.46□□□□□ -0.74
SMG6-202ENST00000354901 SNX1Q13596 522 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 SPATA1Q5VX52 437 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 TMTC3Q6ZXV5 915 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 FMNL3Q8IVF7 1028 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 ACRBPQ8NEB7 543 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 RUFY1Q96T51 708 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 CPVLQ9H3G5 476 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 SRP68Q9UHB9 627 aaKnown RBP10.46□□□□□ -0.74
SMG6-202ENST00000354901 ZNF652Q9Y2D9 606 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 COL4A1P02462 1669 aa10.46□□□□□ -0.74
SMG6-202ENST00000354901 COL1A1P02452 1464 aaPredicted RBP10.45□□□□□ -0.74
SMG6-202ENST00000354901 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 CHUKO15111 745 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 TRIML1Q8N9V2 468 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 CCDC148Q8NFR7 591 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 DYNLL2Q96FJ2 89 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 G3BP2Q9UN86 482 aaKnown RBP10.45□□□□□ -0.74
SMG6-202ENST00000354901 GDAQ9Y2T3 454 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 MYH6P13533 1939 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 DDX60Q8IY21 1712 aaKnown RBP10.45□□□□□ -0.74
SMG6-202ENST00000354901 A0A1B0GTH6 734 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 PP2D1A8MPX8 630 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 ABL1P00519 1130 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 GCFC2P16383 781 aaKnown RBP10.45□□□□□ -0.74
SMG6-202ENST00000354901 ERCC5P28715 1186 aaPredicted RBP10.45□□□□□ -0.74
SMG6-202ENST00000354901 FXR1P51114 621 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMG6-202ENST00000354901 NBPF20Q3BBV1 942 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 TXNRD3Q86VQ6 643 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 NOC3LQ8WTT2 800 aaKnown RBP10.45□□□□□ -0.74
SMG6-202ENST00000354901 CCDC114Q96M63 670 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 C8orf37Q96NL8 207 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 DCP1AQ9NPI6 582 aaPredicted RBP10.45□□□□□ -0.74
SMG6-202ENST00000354901 A0A1B0GUA9 196 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 SYF2O95926 243 aaKnown RBP10.45□□□□□ -0.74
SMG6-202ENST00000354901 IFT88Q13099 833 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 PSMD2Q13200 908 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 UBE4AQ14139 1066 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 NPY5RQ15761 445 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 STAG2Q8N3U4 1231 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 PARD3BQ8TEW8 1205 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 NUP88Q99567 741 aaPredicted RBP10.45□□□□□ -0.74
SMG6-202ENST00000354901 USP21Q9UK80 565 aa10.45□□□□□ -0.74
SMG6-202ENST00000354901 XDHP47989 1333 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 CNTNAP5Q8WYK1 1306 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 PPP1R3GB7ZBB8 358 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 SRGAP2O75044 1071 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 SCG2P13521 617 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 FAM182BQ5T319 152 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 TBC1D9BQ66K14 1250 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 PTF1AQ7RTS3 328 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 SH2D3CQ8N5H7 860 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 NSUN4Q96CB9 384 aaKnown RBP10.44□□□□□ -0.74
SMG6-202ENST00000354901 GPR101Q96P66 508 aaPredicted RBP10.44□□□□□ -0.74
SMG6-202ENST00000354901 CRNKL1Q9BZJ0 848 aaKnown RBP10.44□□□□□ -0.74
SMG6-202ENST00000354901 ADD3Q9UEY8 706 aaKnown RBP10.44□□□□□ -0.74
SMG6-202ENST00000354901 CNTNAP4Q9C0A0 1308 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 TRIM49BA6NDI0 452 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 GOLGA6L9A6NEM1 432 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 EZRP15311 586 aaKnown RBP10.44□□□□□ -0.74
SMG6-202ENST00000354901 RASGRP2Q7LDG7 609 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 FCHSD1Q86WN1 690 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 SLC44A5Q8NCS7 719 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 FERMT2Q96AC1 680 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 SPDL1Q96EA4 605 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 STX8Q9UNK0 236 aa10.44□□□□□ -0.74
SMG6-202ENST00000354901 GOLGA6BA6NDN3 693 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 MYO1BO43795 1136 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 CLSTN1O94985 981 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 GOLGA8HP0CJ92 632 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 HIBADHP31937 336 aaKnown RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 TFAP4Q01664 338 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 IL17AQ16552 155 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 RC3H1Q5TC82 1133 aaKnown RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 APTXQ7Z2E3 356 aaKnown RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 DZIP1Q86YF9 867 aaKnown RBP10.43□□□□□ -0.74
SMG6-202ENST00000354901 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 SPATA20Q8TB22 786 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 MTRQ99707 1265 aa10.43□□□□□ -0.74
SMG6-202ENST00000354901 BSDC1Q9NW68 430 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms