RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 SLC39A5Q6ZMH5 540 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDRT1-202ENST00000354433 CCDC144CPQ8IYA2 1237 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 TTC14Q96N46 770 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 LSG1Q9H089 658 aaKnown RBP13.47□□□□□ -0.25
CDRT1-202ENST00000354433 ABHD16BQ9H3Z7 469 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 CTNNA3Q9UI47 895 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 PLXNA1Q9UIW2 1896 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 SYNRGQ9UMZ2 1314 aa13.47□□□□□ -0.25
CDRT1-202ENST00000354433 SZT2Q5T011 3432 aa13.46□□□□□ -0.25
CDRT1-202ENST00000354433 HSPA4P34932 840 aa13.46□□□□□ -0.25
CDRT1-202ENST00000354433 CNTN2Q02246 1040 aa13.46□□□□□ -0.25
CDRT1-202ENST00000354433 RANBP17Q9H2T7 1088 aaKnown RBP13.46□□□□□ -0.25
CDRT1-202ENST00000354433 KAT14Q9H8E8 782 aa13.46□□□□□ -0.25
CDRT1-202ENST00000354433 SPC25Q9HBM1 224 aa13.46□□□□□ -0.25
CDRT1-202ENST00000354433 ST18O60284 1047 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 C6orf222P0C671 652 aaPredicted RBP13.45□□□□□ -0.26
CDRT1-202ENST00000354433 BMP8BP34820 402 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 NT5C2P49902 561 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 ZNF543Q08ER8 600 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 MUM1L1Q5H9M0 696 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 NOL8Q76FK4 1167 aaKnown RBP13.45□□□□□ -0.26
CDRT1-202ENST00000354433 TDHQ8IZJ6 230 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 FAM133AQ8N9E0 248 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 FGD4Q96M96 766 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 IL25Q9H293 177 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 PHF24Q9UPV7 400 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 A0A1W2PQ45 241 aaPredicted RBP13.45□□□□□ -0.26
CDRT1-202ENST00000354433 A0A1W2PQY0 241 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 PTPDC1A2A3K4 754 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 ASB14A6NK59 587 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 K7ELQ4 463 aaPredicted RBP13.45□□□□□ -0.26
CDRT1-202ENST00000354433 ADAMTS4O75173 837 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 GOLGA8HP0CJ92 632 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 CCDC144BQ3MJ40 725 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 BTNL9Q6UXG8 535 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 DGKHQ86XP1 1220 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 ANP32EQ9BTT0 268 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 KRT23Q9C075 422 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 CNNM2Q9H8M5 875 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 STARD7Q9NQZ5 370 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 CYP39A1Q9NYL5 469 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 TNKSO95271 1327 aa13.45□□□□□ -0.26
CDRT1-202ENST00000354433 ZNFX1Q9P2E3 1918 aaKnown RBP13.44□□□□□ -0.26
CDRT1-202ENST00000354433 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
CDRT1-202ENST00000354433 PQBP1O60828 265 aaKnown RBP13.44□□□□□ -0.26
CDRT1-202ENST00000354433 DUSP11O75319 330 aaKnown RBP13.44□□□□□ -0.26
CDRT1-202ENST00000354433 MCM2P49736 904 aa13.44□□□□□ -0.26
CDRT1-202ENST00000354433 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
CDRT1-202ENST00000354433 EEPD1Q7L9B9 569 aa13.44□□□□□ -0.26
CDRT1-202ENST00000354433 NUP133Q8WUM0 1156 aa13.44□□□□□ -0.26
CDRT1-202ENST00000354433 KCNB2Q92953 911 aa13.44□□□□□ -0.26
CDRT1-202ENST00000354433 LRCH3Q96II8 777 aa13.44□□□□□ -0.26
CDRT1-202ENST00000354433 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
CDRT1-202ENST00000354433 LAMA4Q16363 1823 aa13.44□□□□□ -0.26
CDRT1-202ENST00000354433 MYADML2A6NDP7 307 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 SOWAHBA6NEL2 793 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 MOXD2PA6NHM9 499 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 NFIBO00712 420 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 SNHG28P0DPA3 235 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 TRDNQ13061 729 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 SNX17Q15036 470 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 USH1GQ495M9 461 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 FBXO16Q8IX29 292 aaPredicted RBP13.43□□□□□ -0.26
CDRT1-202ENST00000354433 VTI1AQ96AJ9 217 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 GLT1D1Q96MS3 346 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 ADD3Q9UEY8 706 aaKnown RBP13.43□□□□□ -0.26
CDRT1-202ENST00000354433 PNMA2Q9UL42 364 aa13.43□□□□□ -0.26
CDRT1-202ENST00000354433 SOX1O00570 391 aaPredicted RBP13.42□□□□□ -0.26
CDRT1-202ENST00000354433 ADCY6O43306 1168 aa13.42□□□□□ -0.26
CDRT1-202ENST00000354433 CALML3P27482 149 aa13.42□□□□□ -0.26
CDRT1-202ENST00000354433 ACLYP53396 1101 aa13.42□□□□□ -0.26
CDRT1-202ENST00000354433 BAATQ14032 418 aaPredicted RBP13.42□□□□□ -0.26
CDRT1-202ENST00000354433 KCNA10Q16322 511 aa13.42□□□□□ -0.26
CDRT1-202ENST00000354433 IFIT1BQ5T764 474 aaKnown RBP13.42□□□□□ -0.26
CDRT1-202ENST00000354433 ENAHQ8N8S7 591 aaPredicted RBP13.42□□□□□ -0.26
CDRT1-202ENST00000354433 PCSK9Q8NBP7 692 aaKnown RBP13.42□□□□□ -0.26
CDRT1-202ENST00000354433 PURBQ96QR8 312 aaKnown RBP13.42□□□□□ -0.26
CDRT1-202ENST00000354433 CPVLQ9H3G5 476 aa13.42□□□□□ -0.26
CDRT1-202ENST00000354433 PDLIM7Q9NR12 457 aa13.42□□□□□ -0.26
CDRT1-202ENST00000354433 ZSWIM5Q9P217 1185 aa13.42□□□□□ -0.26
CDRT1-202ENST00000354433 DDX49Q9Y6V7 483 aaKnown RBP13.42□□□□□ -0.26
CDRT1-202ENST00000354433 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.41□□□□□ -0.26
CDRT1-202ENST00000354433 CLTBP09497 229 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 IRX5P78411 483 aaPredicted RBP13.41□□□□□ -0.26
CDRT1-202ENST00000354433 TNFAIP2Q03169 654 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 TLE2Q04725 743 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 C1orf53Q5VUE5 145 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 SLC30A10Q6XR72 485 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 RNF207Q6ZRF8 634 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 RALYLQ86SE5 291 aaKnown RBP13.41□□□□□ -0.26
CDRT1-202ENST00000354433 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 MAP4K1Q92918 833 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 TSEN34Q9BSV6 310 aaKnown RBP13.41□□□□□ -0.26
CDRT1-202ENST00000354433 UBA5Q9GZZ9 404 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 ASTN1O14525 1302 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 WDR19Q8NEZ3 1342 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms