RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 RWDD2AQ9UIY3 292 aa18.84■□□□□ 0.61
SAMM50-201ENST00000350028 PP2D1A8MPX8 630 aa18.83■□□□□ 0.61
SAMM50-201ENST00000350028 CCDC93Q567U6 631 aa18.83■□□□□ 0.61
SAMM50-201ENST00000350028 CDKAL1Q5VV42 579 aa18.83■□□□□ 0.61
SAMM50-201ENST00000350028 SLFN13Q68D06 897 aa18.83■□□□□ 0.61
SAMM50-201ENST00000350028 CCAR2Q8N163 923 aaKnown RBP18.83■□□□□ 0.61
SAMM50-201ENST00000350028 TTLL6Q8N841 843 aa18.83■□□□□ 0.61
SAMM50-201ENST00000350028 TDRD3Q9H7E2 651 aaKnown RBP18.83■□□□□ 0.61
SAMM50-201ENST00000350028 KBTBD4Q9NVX7 518 aa18.83■□□□□ 0.61
SAMM50-201ENST00000350028 PSME4Q14997 1843 aa18.83■□□□□ 0.61
SAMM50-201ENST00000350028 A0A1B0GTH6 734 aa18.83■□□□□ 0.6
SAMM50-201ENST00000350028 YDJCA8MPS7 323 aa18.83■□□□□ 0.6
SAMM50-201ENST00000350028 USP17L10C9JJH3 530 aa18.83■□□□□ 0.6
SAMM50-201ENST00000350028 STX17P56962 302 aa18.83■□□□□ 0.6
SAMM50-201ENST00000350028 TBX2Q13207 712 aaPredicted RBP18.83■□□□□ 0.6
SAMM50-201ENST00000350028 NR1I3Q14994 352 aa18.83■□□□□ 0.6
SAMM50-201ENST00000350028 KCTD1Q719H9 257 aa18.83■□□□□ 0.6
SAMM50-201ENST00000350028 CUL5Q93034 780 aa18.83■□□□□ 0.6
SAMM50-201ENST00000350028 C16orf45Q96MC5 204 aaPredicted RBP18.83■□□□□ 0.6
SAMM50-201ENST00000350028 CTAGE1Q96RT6 745 aa18.83■□□□□ 0.6
SAMM50-201ENST00000350028 PPP1R11O60927 126 aaPredicted RBP18.82■□□□□ 0.6
SAMM50-201ENST00000350028 SLURP2P0DP57 97 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 GTF2F1P35269 517 aaKnown RBP eCLIP18.82■□□□□ 0.63e-7■■■■■ 29.2
SAMM50-201ENST00000350028 SLC16A2P36021 539 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 PTGER2P43116 358 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 CLK2P49760 499 aaKnown RBP18.82■□□□□ 0.6
SAMM50-201ENST00000350028 ABCB5Q2M3G0 1257 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 HSP90AA4PQ58FG1 418 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 SPECC1LQ69YQ0 1117 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 SMYD4Q8IYR2 804 aaPredicted RBP18.82■□□□□ 0.6
SAMM50-201ENST00000350028 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 PSMD1Q99460 953 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 TMX1Q9H3N1 280 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 CTNND2Q9UQB3 1225 aa18.82■□□□□ 0.6
SAMM50-201ENST00000350028 KIF13BQ9NQT8 1826 aa18.81■□□□□ 0.6
SAMM50-201ENST00000350028 FAM196BA6NMK8 535 aa18.81■□□□□ 0.6
SAMM50-201ENST00000350028 SLC1A4P43007 532 aa18.81■□□□□ 0.6
SAMM50-201ENST00000350028 FXR2P51116 673 aaKnown RBP eCLIP18.81■□□□□ 0.6
SAMM50-201ENST00000350028 PAK1Q13153 545 aa18.81■□□□□ 0.6
SAMM50-201ENST00000350028 SEPT2Q15019 361 aa18.81■□□□□ 0.6
SAMM50-201ENST00000350028 CALCRLQ16602 461 aa18.81■□□□□ 0.6
SAMM50-201ENST00000350028 IGSF22Q8N9C0 903 aa18.81■□□□□ 0.6
SAMM50-201ENST00000350028 PRMT6Q96LA8 375 aaPredicted RBP18.81■□□□□ 0.6
SAMM50-201ENST00000350028 NAP1L4Q99733 375 aaKnown RBP18.81■□□□□ 0.6
SAMM50-201ENST00000350028 GTPBP4Q9BZE4 634 aaKnown RBP18.81■□□□□ 0.6
SAMM50-201ENST00000350028 TMOD2Q9NZR1 351 aa18.81■□□□□ 0.6
SAMM50-201ENST00000350028 PAXBP1Q9Y5B6 917 aa18.81■□□□□ 0.6
SAMM50-201ENST00000350028 KIF2AO00139 706 aaPredicted RBP18.8■□□□□ 0.6
SAMM50-201ENST00000350028 CCP110O43303 1012 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 TECP42680 631 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 ICA1Q05084 483 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 SPAG1Q07617 926 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 PTPN14Q15678 1187 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 TMEM266Q2M3C6 531 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 FILIP1LQ4L180 1135 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 PPP4R3AQ6IN85 833 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 RSBN1LQ6PCB5 846 aaPredicted RBP18.8■□□□□ 0.6
SAMM50-201ENST00000350028 NYAP1Q6ZVC0 841 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 SIAH1Q8IUQ4 282 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 GMCL1P1Q8NEA9 526 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 CCDC47Q96A33 483 aaKnown RBP18.8■□□□□ 0.6
SAMM50-201ENST00000350028 CALML4Q96GE6 196 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 RAB34Q9BZG1 259 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 VPS33BQ9H267 617 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 USP27XA6NNY8 438 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 PLCG1P19174 1290 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 AMPD3Q01432 767 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 PDIA5Q14554 519 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 RBM26Q5T8P6 1007 aaKnown RBP18.8■□□□□ 0.6
SAMM50-201ENST00000350028 APTXQ7Z2E3 356 aaKnown RBP18.8■□□□□ 0.6
SAMM50-201ENST00000350028 NELFBQ8WX92 580 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 PSTPIP2Q9H939 334 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 HDAC9Q9UKV0 1011 aa18.8■□□□□ 0.6
SAMM50-201ENST00000350028 EDIL3O43854 480 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 KLRC4O43908 158 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 RHOBTB3O94955 611 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 GCFC2P16383 781 aaKnown RBP18.79■□□□□ 0.6
SAMM50-201ENST00000350028 TXKP42681 527 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 TNNI2P48788 182 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 KMT5BQ4FZB7 885 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 CEP135Q66GS9 1140 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 E4F1Q66K89 784 aaPredicted RBP18.79■□□□□ 0.6
SAMM50-201ENST00000350028 GMCL1Q96IK5 515 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 PLIN2Q99541 437 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 C7orf25Q9BPX7 421 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 HERC5Q9UII4 1024 aaKnown RBP18.79■□□□□ 0.6
SAMM50-201ENST00000350028 SYNPO2Q9UMS6 1093 aa18.79■□□□□ 0.6
SAMM50-201ENST00000350028 TUBB4AP04350 444 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 VIL1P09327 827 aaKnown RBP18.78■□□□□ 0.6
SAMM50-201ENST00000350028 PRCPP42785 496 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 STIM1Q13586 685 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 UBE2SQ16763 222 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 QRICH1Q2TAL8 776 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 MCTP2Q6DN12 878 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 FCHSD1Q86WN1 690 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 ADSSL1Q8N142 457 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 MMTAG2Q9BU76 263 aaKnown RBP18.78■□□□□ 0.6
SAMM50-201ENST00000350028 TRMT1Q9NXH9 659 aaKnown RBP18.78■□□□□ 0.6
SAMM50-201ENST00000350028 ADD3Q9UEY8 706 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms