RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 LONP1P36776 959 aaKnown RBP16.66■□□□□ 0.26
PCDHB13-201ENST00000341948 TRAPPC10P48553 1259 aa16.66■□□□□ 0.26
PCDHB13-201ENST00000341948 PPP2R3AQ06190 1150 aa16.66■□□□□ 0.26
PCDHB13-201ENST00000341948 IFT81Q8WYA0 676 aa16.66■□□□□ 0.26
PCDHB13-201ENST00000341948 JAKMIP2Q96AA8 810 aa16.66■□□□□ 0.26
PCDHB13-201ENST00000341948 DCP1AQ9NPI6 582 aaPredicted RBP16.66■□□□□ 0.26
PCDHB13-201ENST00000341948 RIPOR2Q9Y4F9 1068 aa16.66■□□□□ 0.26
PCDHB13-201ENST00000341948 CLIC4Q9Y696 253 aa16.66■□□□□ 0.26
PCDHB13-201ENST00000341948 MYO3AQ8NEV4 1616 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 NECTIN1Q15223 517 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 EZH2Q15910 746 aaKnown RBP16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 STMN4Q9H169 189 aaPredicted RBP16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 INCENPQ9NQS7 918 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 RABGAP1Q9Y3P9 1069 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 FRMPD1Q5SYB0 1578 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 TUBB2AQ13885 445 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 SLC44A5Q8NCS7 719 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 TUBB2BQ9BVA1 445 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 PANK4Q9NVE7 773 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 ZNRF3Q9ULT6 936 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 PABPN1LA6NDY0 278 aaKnown RBP16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 H0YCG3 227 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 CUL4AQ13619 759 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 SEPT2Q15019 361 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 SEL1L2Q5TEA6 688 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 APOBEC3FQ8IUX4 373 aaKnown RBP16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 PPP1R14CQ8TAE6 165 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 CDHR1Q96JP9 859 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 IQCGQ9H095 443 aaKnown RBP16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 MTRF1LQ9UGC7 380 aaKnown RBP16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 TICAM2Q86XR7 235 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 GPIHBP1Q8IV16 184 aa16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 SYMPKQ92797 1274 aaKnown RBP16.65■□□□□ 0.26
PCDHB13-201ENST00000341948 SPOPO43791 374 aa16.64■□□□□ 0.26
PCDHB13-201ENST00000341948 MYCP01106 439 aaPredicted RBP16.64■□□□□ 0.26
PCDHB13-201ENST00000341948 GCFC2P16383 781 aaKnown RBP16.64■□□□□ 0.26
PCDHB13-201ENST00000341948 NT5C2P49902 561 aa16.64■□□□□ 0.26
PCDHB13-201ENST00000341948 SNAP25P60880 206 aa16.64■□□□□ 0.26
PCDHB13-201ENST00000341948 SLC15A2Q16348 729 aa16.64■□□□□ 0.26
PCDHB13-201ENST00000341948 CD2BP2O95400 341 aaKnown RBP16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 PLA2G12BQ9BX93 195 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 BCRP11274 1271 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 NR5A1Q13285 461 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 DMP1Q13316 513 aaPredicted RBP16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 KRBA2Q6ZNG9 492 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 TRIML1Q8N9V2 468 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 WDR11Q9BZH6 1224 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 SEPT9Q9UHD8 586 aaPredicted RBP16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 PRPF3O43395 683 aaKnown RBP16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 LPXNO60711 386 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 MAGEA1P43355 309 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 CALCOCO2Q13137 446 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 LIN9Q5TKA1 542 aa16.64■□□□□ 0.25
PCDHB13-201ENST00000341948 IQCA1LA6NCM1 817 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 EIF2AK2P19525 551 aaKnown RBP16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 SNX16P57768 344 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 RABL6Q3YEC7 729 aaPredicted RBP16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 FAM26FQ5R3K3 315 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 GPT2Q8TD30 523 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 SLC7A3Q8WY07 619 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 NCOA3Q9Y6Q9 1424 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 PNMA6FA0A0J9YX94 578 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 USP17L5A8MUK1 530 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 LRMPQ12912 555 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 SPP2Q13103 211 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 PPP1R7Q15435 360 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 STAG1Q8WVM7 1258 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 NAP1L3Q99457 506 aaPredicted RBP16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 MAK16Q9BXY0 300 aaKnown RBP16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 IQSEC2Q5JU85 1478 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 UTYO14607 1347 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 XRCC5P13010 732 aaKnown RBP16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 ARHGAP44Q17R89 818 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 SECISBP2LQ93073 1101 aaKnown RBP16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 NRXN1Q9ULB1 1477 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 NKX1-1Q15270 411 aaPredicted RBP16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 UBE2SQ16763 222 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 ODR4Q5SWX8 454 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 C17orf53Q8N3J3 647 aaPredicted RBP16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 OTUD6BQ8N6M0 293 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 NACA2Q9H009 215 aa16.63■□□□□ 0.25
PCDHB13-201ENST00000341948 LAD1O00515 517 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 STAMBPO95630 424 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 HOXA13P31271 388 aaPredicted RBP16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 SLC39A2Q9NP94 309 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 CNTNAP4Q9C0A0 1308 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 GTPBP6O43824 516 aaPredicted RBP16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 CCND2P30279 289 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 ZNF827Q17R98 1081 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 CCDC26Q8TAB7 109 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 CHAMP1Q96JM3 812 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 TMEM47Q9BQJ4 181 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 SSX2IPQ9Y2D8 614 aa16.62■□□□□ 0.25
PCDHB13-201ENST00000341948 PALM3A6NDB9 673 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms