RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ZNF473Q8WTR7 871 aaKnown RBP13.21□□□□□ -0.29
RTN3-203ENST00000341307 CCDC114Q96M63 670 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 NUP58Q9BVL2 599 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 PPP1R1BQ9UD71 204 aaPredicted RBP13.21□□□□□ -0.29
RTN3-203ENST00000341307 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 ERICH2A1L162 156 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 PRKAB2O43741 272 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 CDKL5O76039 1030 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 ANTXR2P58335 489 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 CCDC148Q8NFR7 591 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 STRBPQ96SI9 672 aaKnown RBP13.21□□□□□ -0.29
RTN3-203ENST00000341307 PICK1Q9NRD5 415 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 ABCF2Q9UG63 623 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 CORO1CQ9ULV4 474 aaPredicted RBP13.21□□□□□ -0.29
RTN3-203ENST00000341307 ADGRG1Q9Y653 693 aa13.21□□□□□ -0.29
RTN3-203ENST00000341307 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 PRC1O43663 620 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 MYO1BO43795 1136 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 LINGO3P0C6S8 592 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
RTN3-203ENST00000341307 RANBP1P43487 201 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 NDUFA8P51970 172 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 MAP3K12Q12852 859 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 RBM12BQ8IXT5 1001 aaKnown RBP13.2□□□□□ -0.3
RTN3-203ENST00000341307 STK11IPQ8N1F8 1099 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 STAMBPL1Q96FJ0 436 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 PLEKHG4BQ96PX9 1271 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 SPAG5Q96R06 1193 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 AGXT2Q9BYV1 514 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 GOLGA8KD6RF30 607 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 DNM1LO00429 736 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 MGRN1O60291 552 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 MMP10P09238 476 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 AMPD2Q01433 879 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 TTMPQ5BVD1 217 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 ADGRA1Q86SQ6 560 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 MB21D2Q8IYB1 491 aaPredicted RBP13.2□□□□□ -0.3
RTN3-203ENST00000341307 NSUN7Q8NE18 718 aaKnown RBP13.2□□□□□ -0.3
RTN3-203ENST00000341307 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
RTN3-203ENST00000341307 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 ACTR5Q9H9F9 607 aaPredicted RBP13.2□□□□□ -0.3
RTN3-203ENST00000341307 EPB41L4AQ9HCS5 686 aaPredicted RBP13.2□□□□□ -0.3
RTN3-203ENST00000341307 LRP2BPQ9P2M1 347 aa13.2□□□□□ -0.3
RTN3-203ENST00000341307 ZMYND10O75800 440 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 ME1P48163 572 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 MYO1EQ12965 1108 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 SLC10A5Q5PT55 438 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 RAD9BQ6WBX8 426 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 LCORLQ8N3X6 602 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 EPN3Q9H201 632 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 GGA2Q9UJY4 613 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 COL1A1P02452 1464 aaPredicted RBP13.19□□□□□ -0.3
RTN3-203ENST00000341307 PTPDC1A2A3K4 754 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 PES1O00541 588 aaKnown RBP13.19□□□□□ -0.3
RTN3-203ENST00000341307 ABL1P00519 1130 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 LSP1P33241 339 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 PAPOLAP51003 745 aaKnown RBP13.19□□□□□ -0.3
RTN3-203ENST00000341307 HDLBPQ00341 1268 aaKnown RBP13.19□□□□□ -0.3
RTN3-203ENST00000341307 TPTE2Q6XPS3 522 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
RTN3-203ENST00000341307 TRIM58Q8NG06 486 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 NCOA7Q8NI08 942 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 ARL8AQ96BM9 186 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 OSBPL9Q96SU4 736 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 SGIP1Q9BQI5 828 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 PCDHA7Q9UN72 937 aa13.19□□□□□ -0.3
RTN3-203ENST00000341307 GOLGA6L7A0A1B0GV03 622 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 H3BQV1 296 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 RPS8P62241 208 aaKnown RBP13.18□□□□□ -0.3
RTN3-203ENST00000341307 CTDSPL2Q05D32 466 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 NFIXQ14938 502 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 TBC1D31Q96DN5 1066 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 ZNF570Q96NI8 536 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
RTN3-203ENST00000341307 NYXQ9GZU5 481 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 SPON1Q9HCB6 807 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 C15orf41Q9Y2V0 281 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 A6NNZ2 444 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 B4E1Z4 1266 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 SETSIPP0DME0 302 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 IFFO1Q0D2I5 559 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 TUBB8Q3ZCM7 444 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 CYB5R4Q7L1T6 521 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 VPS37DQ86XT2 251 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 IFNL3Q8IZI9 196 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
RTN3-203ENST00000341307 SLX1AQ9BQ83 275 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 OSBPL7Q9BZF2 842 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 NOD2Q9HC29 1040 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 SENP2Q9HC62 589 aa13.18□□□□□ -0.3
RTN3-203ENST00000341307 KLF18A0A0U1RQI7 1052 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 ATP6V1G2O95670 118 aa13.17□□□□□ -0.3
RTN3-203ENST00000341307 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms