RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 SNRNP48Q6IEG0 339 aaKnown RBP13.24□□□□□ -0.29
C2orf88-201ENST00000340623 NBPF11Q86T75 865 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 LUZP1Q86V48 1076 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 MAD2L2Q9UI95 211 aa13.24□□□□□ -0.29
C2orf88-201ENST00000340623 KIF28PB7ZC32 967 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 hCG_1984214I3L0E3 225 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 FOSP01100 380 aaPredicted RBP13.23□□□□□ -0.29
C2orf88-201ENST00000340623 YBX3P16989 372 aaKnown RBP eCLIP13.23□□□□□ -0.292e-7■□□□□ 9.8
C2orf88-201ENST00000340623 EIF2AK2P19525 551 aaKnown RBP13.23□□□□□ -0.29
C2orf88-201ENST00000340623 HUNKP57058 714 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 ZNF713Q8N859 430 aaPredicted RBP13.23□□□□□ -0.29
C2orf88-201ENST00000340623 FERMT2Q96AC1 680 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 FZD9O00144 591 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 ZNF202O95125 648 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 OR52Z1P0C646 297 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 ANO6Q4KMQ2 910 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 HOXC10Q9NYD6 342 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 A0A087WWV3 80 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 FAM205CA6NFA0 338 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 TPM1P09493 284 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 CDC25AP30304 524 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 KCTD2Q14681 263 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 SLC39A14Q15043 492 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 JMJD4Q9H9V9 463 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 SCN7AQ01118 1682 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 WDR46O15213 610 aaKnown RBP13.23□□□□□ -0.29
C2orf88-201ENST00000340623 ADALQ6DHV7 355 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 LPAR1Q92633 364 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 SCLT1Q96NL6 688 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 ANO3Q9BYT9 981 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 PCDHA12Q9UN75 941 aa13.23□□□□□ -0.29
C2orf88-201ENST00000340623 GLTPD2A6NH11 291 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 GAS7O60861 476 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 STX1AQ16623 288 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 LDHDQ86WU2 507 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 LINC00301Q8NCQ3 95 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 RNF146Q9NTX7 359 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
C2orf88-201ENST00000340623 PFKFB1P16118 471 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
C2orf88-201ENST00000340623 TSR1Q2NL82 804 aaKnown RBP13.22□□□□□ -0.29
C2orf88-201ENST00000340623 TRMT1Q9NXH9 659 aaKnown RBP13.22□□□□□ -0.29
C2orf88-201ENST00000340623 SPEF2Q9C093 1822 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 TBCAO75347 108 aaKnown RBP13.22□□□□□ -0.29
C2orf88-201ENST00000340623 NR1I2O75469 434 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 USP50Q70EL3 339 aaPredicted RBP13.22□□□□□ -0.29
C2orf88-201ENST00000340623 MOB2Q70IA6 237 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 SH3BP5LQ7L8J4 393 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 EEPD1Q7L9B9 569 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 EXOC1Q9NV70 894 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 POLR3EQ9NVU0 708 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 PNMA2Q9UL42 364 aa13.22□□□□□ -0.29
C2orf88-201ENST00000340623 UQCRHLA0A096LP55 91 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 UQCRHP07919 91 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 DLK2Q6UY11 383 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 CABP7Q86V35 215 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
C2orf88-201ENST00000340623 SH3GLB2Q9NR46 395 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 POTEB2H3BUK9 544 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 TRAPPC10P48553 1259 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 COG2Q14746 738 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 CDCA5Q96FF9 252 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 TMX2Q9Y320 296 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 TACC3Q9Y6A5 838 aa13.21□□□□□ -0.29
C2orf88-201ENST00000340623 C4AP0C0L4 1744 aa13.21□□□□□ -0.3
C2orf88-201ENST00000340623 C19orf81C9J6K1 198 aa13.21□□□□□ -0.3
C2orf88-201ENST00000340623 CCNA1P78396 465 aa13.21□□□□□ -0.3
C2orf88-201ENST00000340623 RAD51AP2Q09MP3 1159 aa13.21□□□□□ -0.3
C2orf88-201ENST00000340623 FILIP1LQ4L180 1135 aa13.21□□□□□ -0.3
C2orf88-201ENST00000340623 RNF207Q6ZRF8 634 aa13.21□□□□□ -0.3
C2orf88-201ENST00000340623 ATG4CQ96DT6 458 aa13.21□□□□□ -0.3
C2orf88-201ENST00000340623 RCOR1Q9UKL0 485 aa13.21□□□□□ -0.3
C2orf88-201ENST00000340623 PPP2R3BQ9Y5P8 575 aa13.21□□□□□ -0.3
C2orf88-201ENST00000340623 ZNF157P51786 506 aaPredicted RBP13.2□□□□□ -0.3
C2orf88-201ENST00000340623 NTRK3Q16288 839 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 MCTP2Q6DN12 878 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 NLRX1Q86UT6 975 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 CSRNP2Q9H175 543 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 PNMA3Q9UL41 463 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 STAT3P40763 770 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
C2orf88-201ENST00000340623 EVCP57679 992 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 CYP4A11Q02928 519 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 TYRO3Q06418 890 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 NKX2-3Q8TAU0 364 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 SERTAD1Q9UHV2 236 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 LTBP3Q9NS15 1303 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 SMTNL1A8MU46 457 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 BACE1P56817 501 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 HAUS3Q68CZ6 603 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 DPP9Q86TI2 863 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 GMLQ99445 158 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 GBA2Q9HCG7 927 aaPredicted RBP13.2□□□□□ -0.3
C2orf88-201ENST00000340623 FAM217BQ9NTX9 383 aaPredicted RBP13.2□□□□□ -0.3
C2orf88-201ENST00000340623 PCDHA6Q9UN73 950 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 PCDHA8Q9Y5H6 950 aa13.2□□□□□ -0.3
C2orf88-201ENST00000340623 NDUFA8P51970 172 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms