RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SLC12A4Q9UP95 1085 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 NDUFB9Q9Y6M9 179 aa10.66□□□□□ -0.7
PTCHD4-201ENST00000339488 GLI1P08151 1106 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 DRD4P21917 467 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 CCND1P24385 295 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 CASP1P29466 404 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 CLCN2P51788 898 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 DDB1Q16531 1140 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 HLFQ16534 295 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 OLFML2BQ68BL8 750 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 CCDC70Q6NSX1 233 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 NFRKBQ6P4R8 1299 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 CEP128Q6ZU80 1094 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 SLF2Q8IX21 1173 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 RNF168Q8IYW5 571 aaPredicted RBP10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 CTNNBL1Q8WYA6 563 aaPredicted RBP10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 ABHD10Q9NUJ1 306 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 SLC12A6Q9UHW9 1150 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 WWC3Q9ULE0 1092 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 AOX1Q06278 1338 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 NPHP3-ACAD11A0A0J9YXS1 232 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 A0A1B0GTH6 734 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 PSMD14O00487 310 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 NCK2O43639 380 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 HNRNPCP07910 306 aaKnown RBP eCLIP10.65□□□□□ -0.71e-6■■□□□ 11.8
PTCHD4-201ENST00000339488 SESN3P58005 492 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 NCALDP61601 193 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 ADCY1Q08828 1119 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 RIPK1Q13546 671 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 ZNF268Q14587 947 aaPredicted RBP10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 NANOGNBQ7Z5D8 188 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 LCA5Q86VQ0 697 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 LMNTD2Q8IXW0 634 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 WHAMMQ8TF30 809 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 MKL1Q969V6 931 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 ECT2Q9H8V3 914 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 PIK3C2BO00750 1634 aa10.65□□□□□ -0.7
PTCHD4-201ENST00000339488 PNPLA6Q8IY17 1366 aa10.65□□□□□ -0.71
PTCHD4-201ENST00000339488 A0A0G2JLW4 131 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 MAGEB3O15480 346 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 CCT4P50991 539 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 RAD23BP54727 409 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 RNASE9P60153 205 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 DYNC1I2Q13409 638 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 IDI1Q13907 227 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 EXOC3L1Q86VI1 746 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 TRIM50Q86XT4 487 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 CCDC197Q8NCU1 140 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 KCNG4Q8TDN1 519 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 SRPK1Q96SB4 655 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 DDX50Q9BQ39 737 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 TAF1DQ9H5J8 278 aaPredicted RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 EPB41L5Q9HCM4 733 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 GPHNQ9NQX3 736 aaPredicted RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 MYO5BQ9ULV0 1848 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 SPATA31D1Q6ZQQ2 1576 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 KIF1BO60333 1816 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 TMEM221A6NGB7 291 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 CYP27A1Q02318 531 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 MCL1Q07820 350 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 DHX9Q08211 1270 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 GLE1Q53GS7 698 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 PAPD7Q5XG87 772 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 OR52E8Q6IFG1 317 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 DUS1LQ6P1R4 473 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 EMBQ6PCB8 327 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 GET4Q7L5D6 327 aaPredicted RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 ARHGAP18Q8N392 663 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 SPATA4Q8NEY3 305 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 DDX27Q96GQ7 796 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 MS4A14Q96JA4 679 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 NEK1Q96PY6 1258 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 ELAC2Q9BQ52 826 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 NAA15Q9BXJ9 866 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 VPS16Q9H269 839 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 RBM12Q9NTZ6 932 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 PNMA3Q9UL41 463 aa10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 NOVA2Q9UNW9 492 aaKnown RBP10.64□□□□□ -0.71
PTCHD4-201ENST00000339488 DYTNA2CJ06 578 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 PALM3A6NDB9 673 aaPredicted RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 NDUFA10O95299 355 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 VIL1P09327 827 aaKnown RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 GHRP10912 638 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 ALADP13716 330 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 KRT9P35527 623 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 MRPS35P82673 323 aaKnown RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 PPP4R3AQ6IN85 833 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 C8orf74Q6P047 294 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 C16orf87Q6PH81 154 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 APTXQ7Z2E3 356 aaKnown RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 UBE3BQ7Z3V4 1068 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 DTNBP1Q96EV8 351 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 EPN1Q9Y6I3 576 aaPredicted RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 BOLA2-SMG1P6H3BVE0 249 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 IGHMBP2P38935 993 aaKnown RBP10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 KLC1Q07866 573 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 BICDL1Q6ZP65 573 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 CREG2Q8IUH2 290 aa10.63□□□□□ -0.71
PTCHD4-201ENST00000339488 CARD9Q9H257 536 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms