RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 ZSCAN29Q8IWY8 852 aaPredicted RBP12.57□□□□□ -0.4
LRP1-202ENST00000338962 CDCA5Q96FF9 252 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 PIGSQ96S52 555 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 C6orf50Q9HD87 102 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 NRBP1Q9UHY1 535 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 DACH1Q9UI36 760 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 FRMPD2Q68DX3 1309 aaPredicted RBP12.57□□□□□ -0.4
LRP1-202ENST00000338962 TRAF5O00463 557 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 SMC2O95347 1197 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 NCAPHQ15003 741 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 PPP4R3BQ5MIZ7 849 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 MTERF4Q7Z6M4 381 aaKnown RBP12.57□□□□□ -0.4
LRP1-202ENST00000338962 GRAMD1CQ8IYS0 662 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 TRIML1Q8N9V2 468 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 CCDC17Q96LX7 622 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 PYM1Q9BRP8 204 aaKnown RBP12.57□□□□□ -0.4
LRP1-202ENST00000338962 RIOX1Q9H6W3 641 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 HERC5Q9UII4 1024 aaKnown RBP12.57□□□□□ -0.4
LRP1-202ENST00000338962 MAN1B1Q9UKM7 699 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 A0A087X0B3 334 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 SMCO2A6NFE2 343 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 hCG_1984214I3L0E3 225 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 SNHG28P0DPA3 235 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 TXLNAP40222 546 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 ATP2B2Q01814 1243 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 INF2Q27J81 1249 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 ZNF713Q8N859 430 aaPredicted RBP12.56□□□□□ -0.4
LRP1-202ENST00000338962 TRIM34Q9BYJ4 488 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 UBA5Q9GZZ9 404 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 LONP1P36776 959 aaKnown RBP12.56□□□□□ -0.4
LRP1-202ENST00000338962 SARSP49591 514 aaKnown RBP12.56□□□□□ -0.4
LRP1-202ENST00000338962 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.4
LRP1-202ENST00000338962 KRT25Q7Z3Z0 450 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 IQUBQ8NA54 791 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 KIAA1524Q8TCG1 905 aa12.56□□□□□ -0.4
LRP1-202ENST00000338962 BMP6P22004 513 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 NF2P35240 595 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 AFMP43652 599 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 MORC3Q14149 939 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 DCAF15Q66K64 600 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 DTHD1Q6ZMT9 781 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 FILIP1Q7Z7B0 1213 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 REXO1Q8N1G1 1221 aaKnown RBP12.55□□□□□ -0.4
LRP1-202ENST00000338962 SPATA20Q8TB22 786 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 IFNKQ9P0W0 207 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 ZNF112Q9UJU3 913 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 PRDM4Q9UKN5 801 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
LRP1-202ENST00000338962 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 LAD1O00515 517 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 FKBP1BP68106 108 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 FMR1Q06787 632 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRP1-202ENST00000338962 PDE4CQ08493 712 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 ZNF543Q08ER8 600 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 NONOQ15233 471 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRP1-202ENST00000338962 IL17AQ16552 155 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 CCDC144BQ3MJ40 725 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 DNTTIP2Q5QJE6 756 aaKnown RBP12.54□□□□□ -0.4
LRP1-202ENST00000338962 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
LRP1-202ENST00000338962 CST9Q5W186 159 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 TATDN1Q6P1N9 297 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 C4orf32Q8N8J7 132 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 PAGE5Q96GU1 130 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 XPO4Q9C0E2 1151 aaKnown RBP12.54□□□□□ -0.4
LRP1-202ENST00000338962 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 SSC5DA1L4H1 1573 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 PPP1R12BO60237 982 aaPredicted RBP12.54□□□□□ -0.4
LRP1-202ENST00000338962 USP2O75604 605 aaPredicted RBP12.54□□□□□ -0.4
LRP1-202ENST00000338962 LRMPQ12912 555 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 CCDC96Q2M329 555 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
LRP1-202ENST00000338962 MIGA2Q7L4E1 593 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 C17orf53Q8N3J3 647 aaPredicted RBP12.54□□□□□ -0.4
LRP1-202ENST00000338962 KLRG1Q96E93 195 aa12.54□□□□□ -0.4
LRP1-202ENST00000338962 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 FAM196BA6NMK8 535 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 NEMFO60524 1076 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 SLURP2P0DP57 97 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 ATP1A3P13637 1013 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 FANCCQ00597 558 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 SH3RF1Q7Z6J0 888 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 RASSF8Q8NHQ8 419 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 HSD3B7Q9H2F3 369 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.53□□□□□ -0.4
LRP1-202ENST00000338962 SPTLC3Q9NUV7 552 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
LRP1-202ENST00000338962 CCNT1O60563 726 aaKnown RBP12.53□□□□□ -0.4
LRP1-202ENST00000338962 CELF2O95319 508 aaKnown RBP12.53□□□□□ -0.4
LRP1-202ENST00000338962 SERPINC1P01008 464 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 GSDMDP57764 484 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 E2F4Q16254 413 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 LETM2Q2VYF4 491 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 NEK8Q86SG6 692 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 LRRC8AQ8IWT6 810 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 CACTINQ8WUQ7 758 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms