RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ASPRV1Q53RT3 343 aa17.85■□□□□ 0.45
PRKN-201ENST00000338468 ZNF467Q7Z7K2 595 aaPredicted RBP17.85■□□□□ 0.45
PRKN-201ENST00000338468 TDHQ8IZJ6 230 aa17.85■□□□□ 0.45
PRKN-201ENST00000338468 STAG2Q8N3U4 1231 aa17.85■□□□□ 0.45
PRKN-201ENST00000338468 CLEC4DQ8WXI8 215 aa17.85■□□□□ 0.45
PRKN-201ENST00000338468 GPHNQ9NQX3 736 aaPredicted RBP17.85■□□□□ 0.45
PRKN-201ENST00000338468 STXBP5LQ9Y2K9 1186 aa17.85■□□□□ 0.45
PRKN-201ENST00000338468 SOWAHBA6NEL2 793 aa17.84■□□□□ 0.45
PRKN-201ENST00000338468 SEPT4O43236 478 aa17.84■□□□□ 0.45
PRKN-201ENST00000338468 PARP1P09874 1014 aaKnown RBP17.84■□□□□ 0.45
PRKN-201ENST00000338468 ZNF865P0CJ78 1059 aaPredicted RBP17.84■□□□□ 0.45
PRKN-201ENST00000338468 SYN1P17600 705 aa17.84■□□□□ 0.45
PRKN-201ENST00000338468 SLC35G1Q2M3R5 365 aa17.84■□□□□ 0.45
PRKN-201ENST00000338468 ADGRF4Q8IZF3 695 aa17.84■□□□□ 0.45
PRKN-201ENST00000338468 MSL3Q8N5Y2 521 aaKnown RBP17.84■□□□□ 0.45
PRKN-201ENST00000338468 CYP39A1Q9NYL5 469 aa17.84■□□□□ 0.45
PRKN-201ENST00000338468 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
PRKN-201ENST00000338468 MAD2L2Q9UI95 211 aa17.84■□□□□ 0.45
PRKN-201ENST00000338468 WDR19Q8NEZ3 1342 aa17.83■□□□□ 0.44
PRKN-201ENST00000338468 SYNGAP1Q96PV0 1343 aa17.83■□□□□ 0.44
PRKN-201ENST00000338468 POTEB2H3BUK9 544 aa17.83■□□□□ 0.44
PRKN-201ENST00000338468 NFIBO00712 420 aa17.83■□□□□ 0.44
PRKN-201ENST00000338468 COL6A1P12109 1028 aa17.83■□□□□ 0.44
PRKN-201ENST00000338468 TROAPQ12815 778 aa17.83■□□□□ 0.44
PRKN-201ENST00000338468 ANO1Q5XXA6 986 aa17.83■□□□□ 0.44
PRKN-201ENST00000338468 Q7L0L9 218 aa17.83■□□□□ 0.44
PRKN-201ENST00000338468 JMJD4Q9H9V9 463 aa17.83■□□□□ 0.44
PRKN-201ENST00000338468 PFASO15067 1338 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 PALM3A6NDB9 673 aaPredicted RBP17.82■□□□□ 0.44
PRKN-201ENST00000338468 MSCO60682 206 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 GRM4Q14833 912 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 WTAPQ15007 396 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 CDC37Q16543 378 aaPredicted RBP17.82■□□□□ 0.44
PRKN-201ENST00000338468 TMEM67Q5HYA8 995 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 CASC1Q6TDU7 716 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 RASEFQ8IZ41 740 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 PURBQ96QR8 312 aaKnown RBP17.82■□□□□ 0.44
PRKN-201ENST00000338468 UBE2OQ9C0C9 1292 aaKnown RBP17.82■□□□□ 0.44
PRKN-201ENST00000338468 KATNBL1Q9H079 304 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 LY9Q9HBG7 655 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 DDX49Q9Y6V7 483 aaKnown RBP17.82■□□□□ 0.44
PRKN-201ENST00000338468 MCM3APO60318 1980 aa17.82■□□□□ 0.44
PRKN-201ENST00000338468 PRC1O43663 620 aa17.81■□□□□ 0.44
PRKN-201ENST00000338468 NSMFQ6X4W1 530 aa17.81■□□□□ 0.44
PRKN-201ENST00000338468 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.81■□□□□ 0.44
PRKN-201ENST00000338468 UNC80Q8N2C7 3258 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 ERICH2A1L162 156 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 KLRF2D3W0D1 207 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 SH2B2O14492 632 aaPredicted RBP17.8■□□□□ 0.44
PRKN-201ENST00000338468 MCM5P33992 734 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 BAATQ14032 418 aaPredicted RBP17.8■□□□□ 0.44
PRKN-201ENST00000338468 SART3Q15020 963 aaKnown RBP17.8■□□□□ 0.44
PRKN-201ENST00000338468 QRICH1Q2TAL8 776 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 ARMCX2Q7L311 632 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 CCDC144CPQ8IYA2 1237 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 LENG1Q96BZ8 264 aaPredicted RBP17.8■□□□□ 0.44
PRKN-201ENST00000338468 MTMR8Q96EF0 704 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 MTA3Q9BTC8 594 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 VAT1LQ9HCJ6 419 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 MTMR10Q9NXD2 777 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 PNMA2Q9UL42 364 aa17.8■□□□□ 0.44
PRKN-201ENST00000338468 LRRC37A2A6NM11 1700 aa17.79■□□□□ 0.44
PRKN-201ENST00000338468 ADCY6O43306 1168 aa17.79■□□□□ 0.44
PRKN-201ENST00000338468 ADCK5Q3MIX3 580 aa17.79■□□□□ 0.44
PRKN-201ENST00000338468 TSGA10IPQ3SY00 556 aa17.79■□□□□ 0.44
PRKN-201ENST00000338468 USH1GQ495M9 461 aa17.79■□□□□ 0.44
PRKN-201ENST00000338468 SLC30A10Q6XR72 485 aa17.79■□□□□ 0.44
PRKN-201ENST00000338468 KCNB2Q92953 911 aa17.79■□□□□ 0.44
PRKN-201ENST00000338468 CNPY2Q9Y2B0 182 aa17.79■□□□□ 0.44
PRKN-201ENST00000338468 DNM1LO00429 736 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 CYTH3O43739 400 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 PPP1R11O60927 126 aaPredicted RBP17.78■□□□□ 0.44
PRKN-201ENST00000338468 ACVR2BQ13705 512 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 GJC2Q5T442 439 aaPredicted RBP17.78■□□□□ 0.44
PRKN-201ENST00000338468 RNF20Q5VTR2 975 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 ZNF654Q8IZM8 581 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 MORC4Q8TE76 937 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 TMEM87BQ96K49 555 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 MYL10Q9BUA6 226 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 LRRC2Q9BYS8 371 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 RIOX1Q9H6W3 641 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 DNAH12Q6ZR08 3092 aa17.78■□□□□ 0.44
PRKN-201ENST00000338468 AKR1A1P14550 325 aa17.77■□□□□ 0.44
PRKN-201ENST00000338468 RPS6P62753 249 aaKnown RBP17.77■□□□□ 0.44
PRKN-201ENST00000338468 LRRC41Q15345 812 aa17.77■□□□□ 0.44
PRKN-201ENST00000338468 CATIPQ7Z7H3 387 aa17.77■□□□□ 0.44
PRKN-201ENST00000338468 TBC1D5Q92609 795 aa17.77■□□□□ 0.44
PRKN-201ENST00000338468 ABHD16BQ9H3Z7 469 aa17.77■□□□□ 0.44
PRKN-201ENST00000338468 ZHX1Q9UKY1 873 aaPredicted RBP17.77■□□□□ 0.44
PRKN-201ENST00000338468 ABCB11O95342 1321 aa17.76■□□□□ 0.43
PRKN-201ENST00000338468 PTPDC1A2A3K4 754 aa17.76■□□□□ 0.43
PRKN-201ENST00000338468 ASB14A6NK59 587 aa17.76■□□□□ 0.43
PRKN-201ENST00000338468 OPLAHO14841 1288 aa17.76■□□□□ 0.43
PRKN-201ENST00000338468 DHX16O60231 1041 aaKnown RBP17.76■□□□□ 0.43
PRKN-201ENST00000338468 DDAH1O94760 285 aa17.76■□□□□ 0.43
PRKN-201ENST00000338468 PGK1P00558 417 aa17.76■□□□□ 0.43
PRKN-201ENST00000338468 RARBP10826 455 aa17.76■□□□□ 0.43
PRKN-201ENST00000338468 LIFRP42702 1097 aa17.76■□□□□ 0.43
PRKN-201ENST00000338468 EXOSC10Q01780 885 aaKnown RBP17.76■□□□□ 0.43
PRKN-201ENST00000338468 RNF207Q6ZRF8 634 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms