RNA–Protein interactions for RNA: ENST00000338179.6

LBR-202, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LBR, Length 3,812 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-202ENST00000338179 ARPC5LQ9BPX5 153 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 FAM8A1Q9UBU6 413 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 ITIH6Q6UXX5 1313 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 LTBP1Q14766 1721 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 EML1O00423 815 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 NRDCO43847 1150 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 KIF1CO43896 1103 aaKnown RBP4.36□□□□□ -1.71
LBR-202ENST00000338179 NEFHP12036 1026 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 AARSP49588 968 aaKnown RBP eCLIP4.36□□□□□ -1.71
LBR-202ENST00000338179 ZKSCAN8Q15776 578 aaPredicted RBP4.36□□□□□ -1.71
LBR-202ENST00000338179 CCDC181Q5TID7 509 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 PPP1R42Q7Z4L9 355 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 REXO1L1PQ8IX06 675 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 ANKK1Q8NFD2 765 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 LINS1Q8NG48 757 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 LRGUKQ96M69 825 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 BRMS1Q9HCU9 246 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 BCS1LQ9Y276 419 aa4.36□□□□□ -1.71
LBR-202ENST00000338179 LRRFIP2Q9Y608 721 aaKnown RBP4.36□□□□□ -1.71
LBR-202ENST00000338179 MYH7BA7E2Y1 1941 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 LRRC10BA6NIK2 292 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 EFCAB8A8MWE9 144 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 ARHGAP33O14559 1287 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 KLF4O43474 513 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 SHOX2O60902 331 aaPredicted RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 TADA3O75528 432 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 LIG1P18858 919 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 SATB1Q01826 763 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 PPP2R5AQ15172 486 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 STX1AQ16623 288 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 CCDC158Q5M9N0 1113 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 BNC2Q6ZN30 1099 aaPredicted RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 ANKRD13DQ6ZTN6 518 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 RPAINQ86UA6 219 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 CCDC112Q8NEF3 446 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 GPKOWQ92917 476 aaPredicted RBP eCLIP4.35□□□□□ -1.713e-9■■■□□ 17.8
LBR-202ENST00000338179 VIPAS39Q9H9C1 493 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 CYP46A1Q9Y6A2 500 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 CCP110O43303 1012 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 TUBBP07437 444 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 HMOX1P09601 288 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 SSR1P43307 286 aaKnown RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 ITIH3Q06033 890 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 TCIRG1Q13488 830 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 GRM2Q14416 872 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 NBPF10Q6P3W6 841 aaKnown RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 HOMER1Q86YM7 354 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 KRT222Q8N1A0 295 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 GPATCH11Q8N954 259 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 NSUN7Q8NE18 718 aaKnown RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 DNAAF4Q8WXU2 420 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 ALKBH8Q96BT7 664 aaKnown RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 MAP3K14Q99558 947 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 NUP62CLQ9H1M0 184 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.35□□□□□ -1.712e-7■■■■■ 47
LBR-202ENST00000338179 PDRG1Q9NUG6 133 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 SFMBT1Q9UHJ3 866 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 CFAP45Q9UL16 551 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 POTEB2H3BUK9 544 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 PDE8AO60658 829 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 U2AF2P26368 475 aaKnown RBP eCLIP4.35□□□□□ -1.713e-8■■■□□ 16.5
LBR-202ENST00000338179 HOXA7P31268 230 aaPredicted RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 L1CAMP32004 1257 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 TRAPPC10P48553 1259 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 PTPN5P54829 565 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 COBLL1Q53SF7 1204 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 PLEKHG4Q58EX7 1191 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 ARSJQ5FYB0 599 aaPredicted RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 PPP1R26Q5T8A7 1209 aaPredicted RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 CDC37L1Q7L3B6 337 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 PAF1Q8N7H5 531 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 C1orf127Q8N9H9 656 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 TTC12Q9H892 705 aaPredicted RBP4.35□□□□□ -1.71
LBR-202ENST00000338179 DNAI1Q9UI46 699 aa4.35□□□□□ -1.71
LBR-202ENST00000338179 IL2RAP01589 272 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 IDH3AP50213 366 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 SMTNP53814 917 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 LMNB2Q03252 620 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 COL9A2Q14055 689 aaPredicted RBP4.34□□□□□ -1.71
LBR-202ENST00000338179 PTPAQ15257 358 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 PRPF40BQ6NWY9 871 aaKnown RBP4.34□□□□□ -1.71
LBR-202ENST00000338179 RELL1Q8IUW5 271 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 FBF1Q8TES7 1133 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 PARD3BQ8TEW8 1205 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 COG1Q8WTW3 980 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 DBF4Q9UBU7 674 aaPredicted RBP4.34□□□□□ -1.71
LBR-202ENST00000338179 RTL9Q8NET4 1388 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 GOLGA6L9A6NEM1 432 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 PDPK1O15530 556 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 LMNB1P20700 586 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 MCCD1P59942 119 aaPredicted RBP4.34□□□□□ -1.71
LBR-202ENST00000338179 TRIM28Q13263 835 aaKnown RBP4.34□□□□□ -1.71
LBR-202ENST00000338179 ALX1Q15699 326 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 ZMYM1Q5SVZ6 1142 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 JAKMIP3Q5VZ66 844 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 ARMCX5Q6P1M9 558 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 WDR93Q6P2C0 686 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 MCM10Q7L590 875 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 ERMP1Q7Z2K6 904 aa4.34□□□□□ -1.71
LBR-202ENST00000338179 BRAPQ7Z569 592 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms