RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 MCF2L2Q86YR7 1114 aa18.34■□□□□ 0.53
MRPL55-202ENST00000336300 FBXL16Q8N461 479 aa18.34■□□□□ 0.53
MRPL55-202ENST00000336300 MSL3Q8N5Y2 521 aaKnown RBP18.34■□□□□ 0.53
MRPL55-202ENST00000336300 MAF1Q9H063 256 aa18.34■□□□□ 0.53
MRPL55-202ENST00000336300 SEC63Q9UGP8 760 aaKnown RBP18.34■□□□□ 0.53
MRPL55-202ENST00000336300 MRPL11Q9Y3B7 192 aaKnown RBP18.34■□□□□ 0.53
MRPL55-202ENST00000336300 PLXNB2O15031 1838 aa18.34■□□□□ 0.53
MRPL55-202ENST00000336300 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 CCDC196A0A1B0GTZ2 297 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 PTPDC1A2A3K4 754 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 RCAN1P53805 252 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 CACNB2Q08289 660 aaPredicted RBP18.33■□□□□ 0.52
MRPL55-202ENST00000336300 PPP2R5BQ15173 497 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 HOMER1Q86YM7 354 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 BRF1Q92994 677 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 RRP36Q96EU6 259 aaKnown RBP18.33■□□□□ 0.52
MRPL55-202ENST00000336300 UNC93B1Q9H1C4 597 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.52
MRPL55-202ENST00000336300 FLRT1Q9NZU1 646 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 ZNF236Q9UL36 1845 aa18.33■□□□□ 0.52
MRPL55-202ENST00000336300 DNAJC25-GNG10A0A024R161 153 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 PNMA6FA0A0J9YX94 578 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 GJB1P08034 283 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 RXRAP19793 462 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 CYP2C19P33261 490 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 TRIM32Q13049 653 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 ZNF467Q7Z7K2 595 aaPredicted RBP18.32■□□□□ 0.52
MRPL55-202ENST00000336300 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 MTMR8Q96EF0 704 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 TINF2Q9BSI4 451 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 SPZ1Q9BXG8 430 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
MRPL55-202ENST00000336300 GOLGA8AA7E2F4 631 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 GOLGA8BA8MQT2 603 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 CNGA1P29973 690 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
MRPL55-202ENST00000336300 RTN1Q16799 776 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 RNF207Q6ZRF8 634 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 RAB11FIP4Q86YS3 637 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 PIGSQ96S52 555 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 MPHOSPH6Q99547 160 aaKnown RBP18.31■□□□□ 0.52
MRPL55-202ENST00000336300 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.31■□□□□ 0.52
MRPL55-202ENST00000336300 UPF2Q9HAU5 1272 aaKnown RBP18.31■□□□□ 0.52
MRPL55-202ENST00000336300 PDRG1Q9NUG6 133 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 ADD3Q9UEY8 706 aaKnown RBP18.31■□□□□ 0.52
MRPL55-202ENST00000336300 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
MRPL55-202ENST00000336300 SYNGAP1Q96PV0 1343 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 ASB14A6NK59 587 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 B4DLN1 442 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 NFIBO00712 420 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 SEC24BO95487 1268 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 TFRCP02786 760 aaKnown RBP18.3■□□□□ 0.52
MRPL55-202ENST00000336300 MRPL12P52815 198 aaKnown RBP18.3■□□□□ 0.52
MRPL55-202ENST00000336300 APOBRQ0VD83 1088 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 BAATQ14032 418 aaPredicted RBP18.3■□□□□ 0.52
MRPL55-202ENST00000336300 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 DEFB118Q96PH6 123 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 AGXT2Q9BYV1 514 aa18.3■□□□□ 0.52
MRPL55-202ENST00000336300 UPF3BQ9BZI7 483 aaKnown RBP18.3■□□□□ 0.52
MRPL55-202ENST00000336300 PAK6Q9NQU5 681 aaPredicted RBP18.3■□□□□ 0.52
MRPL55-202ENST00000336300 POTEFA5A3E0 1075 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 CYTH3O43739 400 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 MSCO60682 206 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 SGPL1O95470 568 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 CALML3P27482 149 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 GJA8P48165 433 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 CNTN2Q02246 1040 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 MAMDC4Q6UXC1 1216 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 TMTC3Q6ZXV5 915 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 SRBD1Q8N5C6 995 aaKnown RBP18.29■□□□□ 0.52
MRPL55-202ENST00000336300 FAM133AQ8N9E0 248 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 U2AF1L4Q8WU68 220 aaKnown RBP18.29■□□□□ 0.52
MRPL55-202ENST00000336300 PIBF1Q8WXW3 757 aa18.29■□□□□ 0.52
MRPL55-202ENST00000336300 ZNFX1Q9P2E3 1918 aaKnown RBP18.29■□□□□ 0.52
MRPL55-202ENST00000336300 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
MRPL55-202ENST00000336300 TAL1P17542 331 aaPredicted RBP18.28■□□□□ 0.52
MRPL55-202ENST00000336300 RPS6P62753 249 aaKnown RBP18.28■□□□□ 0.52
MRPL55-202ENST00000336300 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
MRPL55-202ENST00000336300 SAMD3Q8N6K7 520 aa18.28■□□□□ 0.52
MRPL55-202ENST00000336300 MAP3K20Q9NYL2 800 aaKnown RBP18.28■□□□□ 0.52
MRPL55-202ENST00000336300 LOC102724159A0A0B4J2E5 919 aa18.27■□□□□ 0.52
MRPL55-202ENST00000336300 IGHA2P01877 340 aa18.27■□□□□ 0.52
MRPL55-202ENST00000336300 EN2P19622 333 aaPredicted RBP18.27■□□□□ 0.52
MRPL55-202ENST00000336300 CCND3P30281 292 aaPredicted RBP18.27■□□□□ 0.52
MRPL55-202ENST00000336300 PWP2Q15269 919 aaKnown RBP18.27■□□□□ 0.52
MRPL55-202ENST00000336300 CMTR1Q8N1G2 835 aaKnown RBP18.27■□□□□ 0.52
MRPL55-202ENST00000336300 ABHD16BQ9H3Z7 469 aa18.27■□□□□ 0.52
MRPL55-202ENST00000336300 SEPT4O43236 478 aa18.26■□□□□ 0.51
MRPL55-202ENST00000336300 CFBP00751 764 aa18.26■□□□□ 0.51
MRPL55-202ENST00000336300 CYBAP13498 195 aa18.26■□□□□ 0.51
MRPL55-202ENST00000336300 RGS19P49795 217 aa18.26■□□□□ 0.51
MRPL55-202ENST00000336300 EVCP57679 992 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms